Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 NOC2LP1-202ENST00000452600 2235 ntBASIC19.61■□□□□ 0.73
TRIM11Q96F44 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM11Q96F44 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM11Q96F44 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 TSPY17P-201ENST00000450329 467 ntBASIC19.6■□□□□ 0.73
TRIM11Q96F44 RBM17P1-201ENST00000453646 1190 ntBASIC19.6■□□□□ 0.73
TRIM11Q96F44 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRIM11Q96F44 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM11Q96F44 KRT8P50-201ENST00000562022 1438 ntBASIC19.59■□□□□ 0.73
TRIM11Q96F44 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM11Q96F44 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM11Q96F44 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM11Q96F44 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM11Q96F44 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM11Q96F44 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms