Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC3Q96DC8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.52■□□□□ 0.56
ECHDC3Q96DC8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ECHDC3Q96DC8 SDHAP2-201ENST00000455183 2001 ntBASIC18.52■□□□□ 0.55
ECHDC3Q96DC8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
ECHDC3Q96DC8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
ECHDC3Q96DC8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ECHDC3Q96DC8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ECHDC3Q96DC8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ECHDC3Q96DC8 AC009102.3-201ENST00000623118 1491 ntBASIC18.52■□□□□ 0.55
ECHDC3Q96DC8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ECHDC3Q96DC8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 VENTXP5-201ENST00000523979 775 ntBASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ECHDC3Q96DC8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 AC005332.1-201ENST00000577698 1310 ntBASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 MIR662-201ENST00000384847 95 ntBASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ECHDC3Q96DC8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 AC116407.4-201ENST00000623319 1061 ntBASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ECHDC3Q96DC8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms