Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXRED1Q96CU9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
FOXRED1Q96CU9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
FOXRED1Q96CU9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 KRT8P45-201ENST00000414328 1447 ntBASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
FOXRED1Q96CU9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 KRT8P3-201ENST00000519669 1449 ntBASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
FOXRED1Q96CU9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms