Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 RNF126P1-202ENST00000569893 925 ntBASIC18.71■□□□□ 0.59
CHD5Q8TDI0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 AC024563.2-201ENST00000603282 481 ntBASIC18.71■□□□□ 0.59
CHD5Q8TDI0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD5Q8TDI0 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.71■□□□□ 0.59
CHD5Q8TDI0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.71■□□□□ 0.58
CHD5Q8TDI0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 AL136038.3-201ENST00000561909 1096 ntBASIC18.7■□□□□ 0.58
CHD5Q8TDI0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD5Q8TDI0 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.7■□□□□ 0.58
CHD5Q8TDI0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 AC009102.3-201ENST00000623118 1491 ntBASIC18.69■□□□□ 0.58
CHD5Q8TDI0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 AC093010.1-201ENST00000473625 1624 ntBASIC18.69■□□□□ 0.58
CHD5Q8TDI0 LINC01126-201ENST00000623515 1646 ntBASIC18.69■□□□□ 0.58
CHD5Q8TDI0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD5Q8TDI0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 PCED1CP-201ENST00000419887 785 ntBASIC18.68■□□□□ 0.58
CHD5Q8TDI0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 LINC00167-201ENST00000530583 1419 ntBASIC18.68■□□□□ 0.58
CHD5Q8TDI0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 AL020996.1-203ENST00000536896 2307 ntBASIC18.68■□□□□ 0.58
CHD5Q8TDI0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 KRT18P48-201ENST00000434763 852 ntBASIC18.68■□□□□ 0.58
CHD5Q8TDI0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHD5Q8TDI0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms