Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 SIRPAP1-201ENST00000448467 1770 ntBASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RPS4Y2Q8TD47 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
RPS4Y2Q8TD47 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 NIFKP9-201ENST00000419265 221 ntBASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 AC026366.1-201ENST00000488803 879 ntBASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPS4Y2Q8TD47 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 AP000593.1-201ENST00000393668 712 ntBASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 KRT18P29-201ENST00000397031 1267 ntBASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 CKBP1-201ENST00000565489 1086 ntBASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.22■□□□□ 0.19
RPS4Y2Q8TD47 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms