Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 PMS2P2-201ENST00000425039 1128 ntBASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CFAP43Q8NDM7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
CFAP43Q8NDM7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CFAP43Q8NDM7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC28.95■■■□□ 2.23
CFAP43Q8NDM7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC28.95■■■□□ 2.23
CFAP43Q8NDM7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC28.95■■■□□ 2.23
CFAP43Q8NDM7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
CFAP43Q8NDM7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
CFAP43Q8NDM7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC28.95■■■□□ 2.22
CFAP43Q8NDM7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC28.95■■■□□ 2.22
CFAP43Q8NDM7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC28.95■■■□□ 2.22
CFAP43Q8NDM7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CFAP43Q8NDM7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
CFAP43Q8NDM7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CFAP43Q8NDM7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.22
CFAP43Q8NDM7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
CFAP43Q8NDM7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 AF186996.4-201ENST00000467186 377 ntBASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 AC145285.3-201ENST00000564603 959 ntBASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 BNIP3P18-201ENST00000593976 575 ntBASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 AC008608.2-201ENST00000606089 416 ntBASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CFAP43Q8NDM7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 AC005332.3-201ENST00000589904 676 ntBASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 AC005332.7-201ENST00000614046 2005 ntBASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 AC007952.6-201ENST00000573168 2673 ntBASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 AC003957.1-201ENST00000625108 2673 ntBASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 IGHGP-201ENST00000390555 1178 ntBASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 AC139887.3-201ENST00000568585 713 ntBASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 MIR3180-4-201ENST00000582223 153 ntBASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 AL355385.1-201ENST00000606123 409 ntBASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC28.93■■■□□ 2.22
CFAP43Q8NDM7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.92■■■□□ 2.22
CFAP43Q8NDM7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CFAP43Q8NDM7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
CFAP43Q8NDM7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
CFAP43Q8NDM7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CFAP43Q8NDM7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
CFAP43Q8NDM7 AC022898.2-201ENST00000616822 1312 ntBASIC28.9■■■□□ 2.22
CFAP43Q8NDM7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC28.9■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms