Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 AC246785.2-201ENST00000432512 513 ntBASIC18.81■□□□□ 0.6
PGBD3Q8N328 HLA-F-220ENST00000434407 884 ntBASIC18.81■□□□□ 0.6
PGBD3Q8N328 AP000867.3-201ENST00000524675 377 ntBASIC18.81■□□□□ 0.6
PGBD3Q8N328 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PGBD3Q8N328 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD3Q8N328 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.8■□□□□ 0.6
PGBD3Q8N328 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PGBD3Q8N328 AC008556.1-201ENST00000610908 2040 ntBASIC18.8■□□□□ 0.6
PGBD3Q8N328 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 LINC00265-3P-201ENST00000447588 903 ntBASIC18.8■□□□□ 0.6
PGBD3Q8N328 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.8■□□□□ 0.6
PGBD3Q8N328 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.8■□□□□ 0.6
PGBD3Q8N328 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
PGBD3Q8N328 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.8■□□□□ 0.6
PGBD3Q8N328 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PGBD3Q8N328 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.8■□□□□ 0.6
PGBD3Q8N328 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD3Q8N328 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 MIR662-201ENST00000384847 95 ntBASIC18.79■□□□□ 0.6
PGBD3Q8N328 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 AL512353.2-201ENST00000448759 1962 ntBASIC18.79■□□□□ 0.6
PGBD3Q8N328 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PGBD3Q8N328 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD3Q8N328 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PGBD3Q8N328 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.78■□□□□ 0.6
PGBD3Q8N328 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 AC087289.5-201ENST00000586076 3175 ntBASIC18.78■□□□□ 0.6
PGBD3Q8N328 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.78■□□□□ 0.6
PGBD3Q8N328 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.78■□□□□ 0.6
PGBD3Q8N328 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.78■□□□□ 0.6
PGBD3Q8N328 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.78■□□□□ 0.6
PGBD3Q8N328 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PGBD3Q8N328 LINC01711-201ENST00000598340 967 ntBASIC18.78■□□□□ 0.6
PGBD3Q8N328 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD3Q8N328 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PGBD3Q8N328 AL109659.2-201ENST00000606809 1674 ntBASIC18.78■□□□□ 0.6
PGBD3Q8N328 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms