Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SMC5Q8IY18 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
SMC5Q8IY18 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.96■■□□□ 1.27
SMC5Q8IY18 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.96■■□□□ 1.27
SMC5Q8IY18 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.96■■□□□ 1.27
SMC5Q8IY18 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.96■■□□□ 1.27
SMC5Q8IY18 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SMC5Q8IY18 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SMC5Q8IY18 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.96■■□□□ 1.27
SMC5Q8IY18 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 AC067852.2-201ENST00000590513 2313 ntBASIC22.96■■□□□ 1.27
SMC5Q8IY18 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMC5Q8IY18 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 AC007663.1-201ENST00000438948 1240 ntBASIC22.95■■□□□ 1.26
SMC5Q8IY18 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 AL355075.4-201ENST00000554988 638 ntBASIC22.95■■□□□ 1.26
SMC5Q8IY18 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMC5Q8IY18 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.95■■□□□ 1.26
SMC5Q8IY18 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMC5Q8IY18 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 GATB-213ENST00000515812 1893 ntTSL 5 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.94■■□□□ 1.26
SMC5Q8IY18 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMC5Q8IY18 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMC5Q8IY18 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMC5Q8IY18 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMC5Q8IY18 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMC5Q8IY18 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SMC5Q8IY18 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMC5Q8IY18 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 AC138028.4-201ENST00000564984 1845 ntBASIC22.94■■□□□ 1.26
SMC5Q8IY18 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.94■■□□□ 1.26
SMC5Q8IY18 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMC5Q8IY18 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMC5Q8IY18 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMC5Q8IY18 KRT8P7-201ENST00000533003 1432 ntBASIC22.93■■□□□ 1.26
SMC5Q8IY18 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMC5Q8IY18 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMC5Q8IY18 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMC5Q8IY18 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.93■■□□□ 1.26
SMC5Q8IY18 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
SMC5Q8IY18 SNORA78-201ENST00000459373 127 ntBASIC22.93■■□□□ 1.26
SMC5Q8IY18 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMC5Q8IY18 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMC5Q8IY18 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.93■■□□□ 1.26
SMC5Q8IY18 PHGDH-209ENST00000641074 1780 ntBASIC22.93■■□□□ 1.26
SMC5Q8IY18 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMC5Q8IY18 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.93■■□□□ 1.26
SMC5Q8IY18 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SMC5Q8IY18 REXO1L9P-201ENST00000604264 2108 ntBASIC22.93■■□□□ 1.26
SMC5Q8IY18 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.93■■□□□ 1.26
SMC5Q8IY18 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.93■■□□□ 1.26
SMC5Q8IY18 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
SMC5Q8IY18 AC099343.3-201ENST00000605834 2503 ntBASIC22.92■■□□□ 1.26
SMC5Q8IY18 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.92■■□□□ 1.26
SMC5Q8IY18 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMC5Q8IY18 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMC5Q8IY18 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMC5Q8IY18 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.92■■□□□ 1.26
SMC5Q8IY18 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
SMC5Q8IY18 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
SMC5Q8IY18 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMC5Q8IY18 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms