Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM42Q8IWZ5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 CD99P1-205ENST00000527459 561 ntBASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 AC120498.8-201ENST00000614275 531 ntBASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 AC092368.3-202ENST00000574180 1591 ntBASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 AC093677.2-201ENST00000600169 1863 ntBASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM42Q8IWZ5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 KRT8P45-201ENST00000414328 1447 ntBASIC18.49■□□□□ 0.55
TRIM42Q8IWZ5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 HLA-B-256ENST00000639848 1089 ntBASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 MYC-209ENST00000641252 345 ntBASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM42Q8IWZ5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM42Q8IWZ5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms