Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
APLFQ8IW19 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
APLFQ8IW19 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.38■□□□□ 0.53
APLFQ8IW19 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.38■□□□□ 0.53
APLFQ8IW19 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.38■□□□□ 0.53
APLFQ8IW19 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.38■□□□□ 0.53
APLFQ8IW19 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.38■□□□□ 0.53
APLFQ8IW19 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.38■□□□□ 0.53
APLFQ8IW19 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.38■□□□□ 0.53
APLFQ8IW19 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.38■□□□□ 0.53
APLFQ8IW19 AC010947.1-201ENST00000623454 693 ntBASIC18.38■□□□□ 0.53
APLFQ8IW19 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.38■□□□□ 0.53
APLFQ8IW19 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
APLFQ8IW19 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
APLFQ8IW19 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
APLFQ8IW19 CYP2D8P-201ENST00000433633 1490 ntBASIC18.38■□□□□ 0.53
APLFQ8IW19 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
APLFQ8IW19 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
APLFQ8IW19 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.37■□□□□ 0.53
APLFQ8IW19 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.37■□□□□ 0.53
APLFQ8IW19 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.37■□□□□ 0.53
APLFQ8IW19 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.37■□□□□ 0.53
APLFQ8IW19 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
APLFQ8IW19 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.37■□□□□ 0.53
APLFQ8IW19 AL391005.1-201ENST00000623953 2435 ntBASIC18.37■□□□□ 0.53
APLFQ8IW19 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.37■□□□□ 0.53
APLFQ8IW19 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.37■□□□□ 0.53
APLFQ8IW19 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.37■□□□□ 0.53
APLFQ8IW19 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.37■□□□□ 0.53
APLFQ8IW19 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 AL031985.4-201ENST00000642138 673 ntBASIC18.37■□□□□ 0.53
APLFQ8IW19 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
APLFQ8IW19 AL031598.1-201ENST00000561511 1773 ntBASIC18.37■□□□□ 0.53
APLFQ8IW19 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
APLFQ8IW19 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.37■□□□□ 0.53
APLFQ8IW19 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APLFQ8IW19 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 TERF1P1-201ENST00000311003 1181 ntBASIC18.36■□□□□ 0.53
APLFQ8IW19 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.36■□□□□ 0.53
APLFQ8IW19 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
APLFQ8IW19 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 AL137013.1-201ENST00000432946 1228 ntBASIC18.36■□□□□ 0.53
APLFQ8IW19 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.36■□□□□ 0.53
APLFQ8IW19 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.36■□□□□ 0.53
APLFQ8IW19 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.36■□□□□ 0.53
APLFQ8IW19 AC006333.2-201ENST00000607957 2099 ntBASIC18.36■□□□□ 0.53
APLFQ8IW19 AC073508.3-201ENST00000619697 1419 ntBASIC18.36■□□□□ 0.53
APLFQ8IW19 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.36■□□□□ 0.53
APLFQ8IW19 ABALON-201ENST00000629058 1903 ntBASIC18.36■□□□□ 0.53
APLFQ8IW19 Z98044.1-201ENST00000632503 1764 ntBASIC18.36■□□□□ 0.53
APLFQ8IW19 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.36■□□□□ 0.53
APLFQ8IW19 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
APLFQ8IW19 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
APLFQ8IW19 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
APLFQ8IW19 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
APLFQ8IW19 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
APLFQ8IW19 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
APLFQ8IW19 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.35■□□□□ 0.53
APLFQ8IW19 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms