Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDDC2Q7Z4H3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HDDC2Q7Z4H3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.89■□□□□ 0.3
HDDC2Q7Z4H3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HDDC2Q7Z4H3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
HDDC2Q7Z4H3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HDDC2Q7Z4H3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.89■□□□□ 0.3
HDDC2Q7Z4H3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HDDC2Q7Z4H3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 GCSHP5-201ENST00000443090 522 ntBASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 AC091390.4-202ENST00000476426 537 ntBASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 MIR6786-201ENST00000616843 113 ntBASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 Z98044.1-201ENST00000632503 1764 ntBASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.89■□□□□ 0.29
HDDC2Q7Z4H3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 AL158047.1-201ENST00000445918 881 ntBASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 CD177P1-201ENST00000606252 935 ntBASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 DGCR10-201ENST00000609839 495 ntBASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDDC2Q7Z4H3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDDC2Q7Z4H3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDDC2Q7Z4H3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDDC2Q7Z4H3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDDC2Q7Z4H3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HDDC2Q7Z4H3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDDC2Q7Z4H3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms