Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 LINC01238-205ENST00000567549 1107 ntBASIC17.79■□□□□ 0.44
RNF44Q7L0R7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 AL590326.2-201ENST00000625139 305 ntBASIC17.79■□□□□ 0.44
RNF44Q7L0R7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF44Q7L0R7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 AC092647.4-201ENST00000457211 535 ntBASIC17.78■□□□□ 0.44
RNF44Q7L0R7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF44Q7L0R7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 BX323043.1-201ENST00000641006 1765 ntBASIC17.77■□□□□ 0.44
RNF44Q7L0R7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.77■□□□□ 0.44
RNF44Q7L0R7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 AC104390.1-201ENST00000555663 520 ntBASIC17.77■□□□□ 0.44
RNF44Q7L0R7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF44Q7L0R7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF44Q7L0R7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF44Q7L0R7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF44Q7L0R7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF44Q7L0R7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF44Q7L0R7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF44Q7L0R7 AC087289.5-201ENST00000586076 3175 ntBASIC17.77■□□□□ 0.43
RNF44Q7L0R7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF44Q7L0R7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF44Q7L0R7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF44Q7L0R7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF44Q7L0R7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
RNF44Q7L0R7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF44Q7L0R7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF44Q7L0R7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF44Q7L0R7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF44Q7L0R7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF44Q7L0R7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF44Q7L0R7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms