Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 AL499627.1-201ENST00000569373 2188 ntBASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 AP000974.1-201ENST00000623909 2387 ntBASIC18.59■□□□□ 0.57
GDPD4Q6W3E5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GDPD4Q6W3E5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GDPD4Q6W3E5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.58■□□□□ 0.57
GDPD4Q6W3E5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GDPD4Q6W3E5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.58■□□□□ 0.57
GDPD4Q6W3E5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 AC116407.4-201ENST00000623319 1061 ntBASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDPD4Q6W3E5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 AL645929.1-201ENST00000420084 975 ntBASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 AL031598.1-201ENST00000561511 1773 ntBASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.57■□□□□ 0.56
GDPD4Q6W3E5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 MIR149-201ENST00000384879 89 ntBASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.56■□□□□ 0.56
GDPD4Q6W3E5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 BX323043.1-201ENST00000641006 1765 ntBASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 CROCCP3-202ENST00000420820 1947 ntBASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 AC018445.3-201ENST00000624177 1945 ntBASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 MIR662-201ENST00000384847 95 ntBASIC18.55■□□□□ 0.56
GDPD4Q6W3E5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms