Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.32■□□□□ 0.68
TTC39BQ5VTQ0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 AC090164.3-201ENST00000610780 2143 ntBASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 AC005082.1-201ENST00000413042 2259 ntBASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 AC036111.1-201ENST00000533973 1582 ntBASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TTC39BQ5VTQ0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 AK4P3-201ENST00000418260 669 ntBASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 AC117947.1-201ENST00000427448 529 ntBASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 YBX1P2-201ENST00000489612 999 ntBASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 AL049597.2-201ENST00000565575 961 ntBASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 LINC01238-205ENST00000567549 1107 ntBASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC39BQ5VTQ0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 RNF152P1-201ENST00000397754 604 ntBASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 DUX4L26-201ENST00000489078 1255 ntBASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 AC140113.3-201ENST00000605663 199 ntBASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.29■□□□□ 0.68
TTC39BQ5VTQ0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms