Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 KRT18P16-201ENST00000510337 1294 ntBASIC17.88■□□□□ 0.45
RNF220Q5VTB9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 AL596257.1-201ENST00000641463 2694 ntBASIC17.87■□□□□ 0.45
RNF220Q5VTB9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 AIRN-201ENST00000601203 4374 ntBASIC17.87■□□□□ 0.45
RNF220Q5VTB9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 AL355802.2-201ENST00000402069 882 ntBASIC17.87■□□□□ 0.45
RNF220Q5VTB9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 UNC93B4-201ENST00000505679 747 ntBASIC17.87■□□□□ 0.45
RNF220Q5VTB9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF220Q5VTB9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 AC011676.5-201ENST00000624864 2660 ntBASIC17.86■□□□□ 0.45
RNF220Q5VTB9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 HLA-L-209ENST00000420110 1011 ntBASIC17.86■□□□□ 0.45
RNF220Q5VTB9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 NKILA-202ENST00000614771 2598 ntBASIC17.86■□□□□ 0.45
RNF220Q5VTB9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.86■□□□□ 0.45
RNF220Q5VTB9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 AL513477.1-201ENST00000602865 2407 ntBASIC17.86■□□□□ 0.45
RNF220Q5VTB9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNF220Q5VTB9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RNF220Q5VTB9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms