Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGO1Q5FBB7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 RPS2P55-201ENST00000397318 883 ntBASIC18.04■□□□□ 0.48
SGO1Q5FBB7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 UBE2SP1-201ENST00000450587 669 ntBASIC18.04■□□□□ 0.48
SGO1Q5FBB7 AC107956.1-201ENST00000494359 873 ntBASIC18.04■□□□□ 0.48
SGO1Q5FBB7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 AP000692.2-201ENST00000608391 879 ntBASIC18.04■□□□□ 0.48
SGO1Q5FBB7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 BICD1-207ENST00000551848 1962 ntBASIC18.04■□□□□ 0.48
SGO1Q5FBB7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGO1Q5FBB7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SGO1Q5FBB7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.02■□□□□ 0.48
SGO1Q5FBB7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms