Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALFQ53S48 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
ALFQ53S48 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.06■□□□□ 0.64
ALFQ53S48 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ALFQ53S48 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALFQ53S48 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALFQ53S48 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ALFQ53S48 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.06■□□□□ 0.64
ALFQ53S48 HOMER2P1-201ENST00000455653 964 ntBASIC19.06■□□□□ 0.64
ALFQ53S48 KRT18P35-201ENST00000510488 1269 ntBASIC19.06■□□□□ 0.64
ALFQ53S48 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ALFQ53S48 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.06■□□□□ 0.64
ALFQ53S48 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.06■□□□□ 0.64
ALFQ53S48 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALFQ53S48 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
ALFQ53S48 AL445228.2-201ENST00000605589 952 ntBASIC19.06■□□□□ 0.64
ALFQ53S48 AC010240.3-201ENST00000607688 395 ntBASIC19.06■□□□□ 0.64
ALFQ53S48 AL590326.2-201ENST00000625139 305 ntBASIC19.06■□□□□ 0.64
ALFQ53S48 AL157888.1-201ENST00000631930 593 ntBASIC19.06■□□□□ 0.64
ALFQ53S48 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALFQ53S48 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALFQ53S48 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALFQ53S48 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ALFQ53S48 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ALFQ53S48 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 STARP1-201ENST00000397973 869 ntBASIC19.05■□□□□ 0.64
ALFQ53S48 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.05■□□□□ 0.64
ALFQ53S48 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 RASA4DP-201ENST00000460726 1199 ntBASIC19.05■□□□□ 0.64
ALFQ53S48 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.05■□□□□ 0.64
ALFQ53S48 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.05■□□□□ 0.64
ALFQ53S48 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.05■□□□□ 0.64
ALFQ53S48 MIR3917-201ENST00000580971 93 ntBASIC19.05■□□□□ 0.64
ALFQ53S48 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.05■□□□□ 0.64
ALFQ53S48 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.05■□□□□ 0.64
ALFQ53S48 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.05■□□□□ 0.64
ALFQ53S48 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.05■□□□□ 0.64
ALFQ53S48 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALFQ53S48 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
ALFQ53S48 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.05■□□□□ 0.64
ALFQ53S48 AC005082.1-201ENST00000413042 2259 ntBASIC19.04■□□□□ 0.64
ALFQ53S48 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
ALFQ53S48 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
ALFQ53S48 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.04■□□□□ 0.64
ALFQ53S48 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.04■□□□□ 0.64
ALFQ53S48 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.04■□□□□ 0.64
ALFQ53S48 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ALFQ53S48 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.04■□□□□ 0.64
ALFQ53S48 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ALFQ53S48 MYC-208ENST00000641036 567 ntBASIC19.04■□□□□ 0.64
ALFQ53S48 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALFQ53S48 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ALFQ53S48 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.03■□□□□ 0.64
ALFQ53S48 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
ALFQ53S48 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.03■□□□□ 0.64
ALFQ53S48 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ALFQ53S48 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.03■□□□□ 0.64
ALFQ53S48 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALFQ53S48 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms