Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
USH1GQ495M9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.26■□□□□ 0.99
USH1GQ495M9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USH1GQ495M9 PVRIG2P-201ENST00000435460 978 ntBASIC21.26■□□□□ 0.99
USH1GQ495M9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
USH1GQ495M9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.26■□□□□ 0.99
USH1GQ495M9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.26■□□□□ 0.99
USH1GQ495M9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.26■□□□□ 0.99
USH1GQ495M9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.26■□□□□ 0.99
USH1GQ495M9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USH1GQ495M9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USH1GQ495M9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.25■□□□□ 0.99
USH1GQ495M9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
USH1GQ495M9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USH1GQ495M9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 MIR662-201ENST00000384847 95 ntBASIC21.25■□□□□ 0.99
USH1GQ495M9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.25■□□□□ 0.99
USH1GQ495M9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
USH1GQ495M9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.25■□□□□ 0.99
USH1GQ495M9 RNF126P1-202ENST00000569893 925 ntBASIC21.25■□□□□ 0.99
USH1GQ495M9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.25■□□□□ 0.99
USH1GQ495M9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.25■□□□□ 0.99
USH1GQ495M9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.25■□□□□ 0.99
USH1GQ495M9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.25■□□□□ 0.99
USH1GQ495M9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.25■□□□□ 0.99
USH1GQ495M9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
USH1GQ495M9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USH1GQ495M9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
USH1GQ495M9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.24■□□□□ 0.99
USH1GQ495M9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.24■□□□□ 0.99
USH1GQ495M9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.24■□□□□ 0.99
USH1GQ495M9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
USH1GQ495M9 MIR3180-4-201ENST00000582223 153 ntBASIC21.24■□□□□ 0.99
USH1GQ495M9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
USH1GQ495M9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.24■□□□□ 0.99
USH1GQ495M9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
USH1GQ495M9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.24■□□□□ 0.99
USH1GQ495M9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USH1GQ495M9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.24■□□□□ 0.99
USH1GQ495M9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USH1GQ495M9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.24■□□□□ 0.99
USH1GQ495M9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
USH1GQ495M9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USH1GQ495M9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USH1GQ495M9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
USH1GQ495M9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.23■□□□□ 0.99
USH1GQ495M9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USH1GQ495M9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USH1GQ495M9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USH1GQ495M9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USH1GQ495M9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
USH1GQ495M9 BX276092.5-203ENST00000456199 560 ntBASIC21.23■□□□□ 0.99
USH1GQ495M9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
USH1GQ495M9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.23■□□□□ 0.99
USH1GQ495M9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.23■□□□□ 0.99
USH1GQ495M9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USH1GQ495M9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USH1GQ495M9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USH1GQ495M9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.23■□□□□ 0.99
USH1GQ495M9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USH1GQ495M9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USH1GQ495M9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USH1GQ495M9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USH1GQ495M9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USH1GQ495M9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USH1GQ495M9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USH1GQ495M9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.22■□□□□ 0.99
USH1GQ495M9 KRT18P41-201ENST00000518924 1277 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms