Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC5.69□□□□□ -1.58e-8■□□□□ 11
SRSF1Q07955 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.58e-8■□□□□ 11
SRSF1Q07955 GAPVD1-212ENST00000467750 3163 ntTSL 55.57□□□□□ -1.528e-8■□□□□ 11
SRSF1Q07955 GAPVD1-208ENST00000431329 2512 ntTSL 25.36□□□□□ -1.558e-8■□□□□ 11
SRSF1Q07955 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.8□□□□□ -1.648e-8■□□□□ 11
SRSF1Q07955 CSNK1D-218ENST00000581655 549 ntTSL 413.23□□□□□ -0.292e-6■□□□□ 10.9
SRSF1Q07955 PRODH2-203ENST00000587808 515 ntTSL 212.92□□□□□ -0.342e-6■□□□□ 10.9
SRSF1Q07955 CFB-272ENST00000452035 1866 ntTSL 212.76□□□□□ -0.372e-6■□□□□ 10.9
SRSF1Q07955 CFB-274ENST00000461483 1277 ntTSL 511.58□□□□□ -0.562e-6■□□□□ 10.9
SRSF1Q07955 ASMTL-AS1-202ENST00000420411 697 ntTSL 1 (best)9.82□□□□□ -0.842e-6■□□□□ 10.9
SRSF1Q07955 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.012e-6■□□□□ 10.9
SRSF1Q07955 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC8.31□□□□□ -1.082e-6■□□□□ 10.9
SRSF1Q07955 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.22e-6■□□□□ 10.9
SRSF1Q07955 CFB-283ENST00000497841 736 ntTSL 37.29□□□□□ -1.242e-6■□□□□ 10.9
SRSF1Q07955 CFB-282ENST00000483004 940 ntTSL 57.19□□□□□ -1.262e-6■□□□□ 10.9
SRSF1Q07955 CFB-275ENST00000465750 568 ntTSL 27.1□□□□□ -1.272e-6■□□□□ 10.9
SRSF1Q07955 CFB-276ENST00000467150 526 ntTSL 26.24□□□□□ -1.412e-6■□□□□ 10.9
SRSF1Q07955 CHD4-214ENST00000545942 1317 ntTSL 1 (best)21.75■■□□□ 1.071e-7■□□□□ 10.9
SRSF1Q07955 CYHR1-212ENST00000533764 853 ntTSL 221.34■■□□□ 1.011e-7■□□□□ 10.9
SRSF1Q07955 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.49■□□□□ 0.711e-7■□□□□ 10.9
SRSF1Q07955 CHD4-213ENST00000545584 553 ntTSL 418.95■□□□□ 0.621e-7■□□□□ 10.9
SRSF1Q07955 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.2■□□□□ 0.51e-7■□□□□ 10.9
SRSF1Q07955 FASTK-206ENST00000465272 457 ntTSL 217.97■□□□□ 0.471e-7■□□□□ 10.9
SRSF1Q07955 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.39■□□□□ 0.371e-7■□□□□ 10.9
SRSF1Q07955 LINC01311-201ENST00000565162 1445 ntBASIC17.3■□□□□ 0.361e-7■□□□□ 10.9
SRSF1Q07955 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.24■□□□□ 0.351e-7■□□□□ 10.9
SRSF1Q07955 CYHR1-205ENST00000524623 592 ntTSL 1 (best)17.22■□□□□ 0.351e-7■□□□□ 10.9
SRSF1Q07955 CYHR1-206ENST00000526887 1012 ntTSL 316.42■□□□□ 0.221e-7■□□□□ 10.9
SRSF1Q07955 FASTK-203ENST00000459800 449 ntTSL 216.38■□□□□ 0.211e-7■□□□□ 10.9
SRSF1Q07955 CYHR1-210ENST00000530637 581 ntTSL 316.16■□□□□ 0.181e-7■□□□□ 10.9
SRSF1Q07955 HDAC7-224ENST00000488927 739 ntTSL 514.27□□□□□ -0.131e-7■□□□□ 10.9
SRSF1Q07955 BCR-208ENST00000466076 495 ntTSL 313.93□□□□□ -0.181e-7■□□□□ 10.9
SRSF1Q07955 HDAC7-222ENST00000477937 410 ntTSL 513.02□□□□□ -0.331e-7■□□□□ 10.9
SRSF1Q07955 GPI-204ENST00000586392 1706 ntTSL 213□□□□□ -0.331e-7■□□□□ 10.9
SRSF1Q07955 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.331e-7■□□□□ 10.9
SRSF1Q07955 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.431e-7■□□□□ 10.9
SRSF1Q07955 BCR-204ENST00000427791 771 ntTSL 1 (best)11.55□□□□□ -0.561e-7■□□□□ 10.9
SRSF1Q07955 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC10.43□□□□□ -0.741e-7■□□□□ 10.9
SRSF1Q07955 BCR-215ENST00000487968 2870 ntTSL 29.14□□□□□ -0.951e-7■□□□□ 10.9
SRSF1Q07955 HADHA-201ENST00000380649 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.121e-7■□□□□ 10.9
SRSF1Q07955 TARDBP-220ENST00000618606 584 ntTSL 23.69□□□□□ -1.821e-7■□□□□ 10.9
SRSF1Q07955 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.562e-7■□□□□ 10.9
SRSF1Q07955 METTL17-211ENST00000554849 915 ntTSL 511.34□□□□□ -0.596e-7■□□□□ 10.9
SRSF1Q07955 METTL17-203ENST00000553389 952 ntTSL 28.87□□□□□ -0.996e-7■□□□□ 10.9
SRSF1Q07955 AARS-207ENST00000569825 871 ntTSL 215.19■□□□□ 0.021e-10■□□□□ 10.9
SRSF1Q07955 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.544e-6■□□□□ 10.9
SRSF1Q07955 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.714e-6■□□□□ 10.9
SRSF1Q07955 AC024267.1-201ENST00000582320 895 ntBASIC14.26□□□□□ -0.139e-7■□□□□ 10.9
SRSF1Q07955 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.77□□□□□ -0.699e-8■□□□□ 10.9
SRSF1Q07955 BCL6-205ENST00000438077 709 ntTSL 319.27■□□□□ 0.683e-8■□□□□ 10.9
SRSF1Q07955 GPBP1L1-214ENST00000498128 559 ntTSL 39.39□□□□□ -0.913e-8■□□□□ 10.9
SRSF1Q07955 BCL6-203ENST00000419510 4178 ntTSL 27.35□□□□□ -1.233e-8■□□□□ 10.9
SRSF1Q07955 GPBP1L1-213ENST00000496278 1529 ntTSL 26.4□□□□□ -1.393e-8■□□□□ 10.9
SRSF1Q07955 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.43e-8■□□□□ 10.9
SRSF1Q07955 BTAF1-202ENST00000471217 2003 ntTSL 1 (best)5.85□□□□□ -1.472e-7■□□□□ 10.9
SRSF1Q07955 ACACA-239ENST00000617548 1063 ntTSL 1 (best)21.59■■□□□ 1.052e-8■□□□□ 10.9
SRSF1Q07955 VPS36-203ENST00000475375 754 ntTSL 220.6■□□□□ 0.894e-6■□□□□ 10.9
SRSF1Q07955 SPATA20-212ENST00000505559 1590 ntTSL 220.42■□□□□ 0.864e-6■□□□□ 10.9
SRSF1Q07955 ACACA-238ENST00000616352 1626 ntTSL 1 (best)20.12■□□□□ 0.812e-8■□□□□ 10.9
SRSF1Q07955 ACACA-236ENST00000615229 1468 ntTSL 1 (best)19.39■□□□□ 0.692e-8■□□□□ 10.9
SRSF1Q07955 GAS8-204ENST00000540721 1308 ntTSL 218.76■□□□□ 0.594e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-205ENST00000585866 686 ntTSL 218.18■□□□□ 0.54e-6■□□□□ 10.9
SRSF1Q07955 SPATA20-213ENST00000505656 975 ntTSL 518.18■□□□□ 0.54e-6■□□□□ 10.9
SRSF1Q07955 ID3-203ENST00000486541 892 ntTSL 1 (best)17.95■□□□□ 0.464e-6■□□□□ 10.9
SRSF1Q07955 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.454e-6■□□□□ 10.9
SRSF1Q07955 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.84■□□□□ 0.454e-6■□□□□ 10.9
SRSF1Q07955 KRT19-202ENST00000455635 641 ntTSL 317.81■□□□□ 0.444e-6■□□□□ 10.9
SRSF1Q07955 GAS8-212ENST00000565062 1394 ntTSL 217.71■□□□□ 0.434e-6■□□□□ 10.9
SRSF1Q07955 SPATA20-221ENST00000512181 1456 ntTSL 216.73■□□□□ 0.274e-6■□□□□ 10.9
SRSF1Q07955 GAS8-217ENST00000568705 659 ntTSL 316.55■□□□□ 0.244e-6■□□□□ 10.9
SRSF1Q07955 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.234e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.24e-6■□□□□ 10.9
SRSF1Q07955 GAS8-213ENST00000565957 549 ntTSL 416.21■□□□□ 0.194e-6■□□□□ 10.9
SRSF1Q07955 KRT19-204ENST00000468880 868 ntTSL 215.16■□□□□ 0.024e-6■□□□□ 10.9
SRSF1Q07955 MYLK-AS1-201ENST00000463408 568 ntTSL 415.07■□□□□ 04e-6■□□□□ 10.9
SRSF1Q07955 GAS8-203ENST00000537797 1080 ntTSL 214.86□□□□□ -0.034e-6■□□□□ 10.9
SRSF1Q07955 SMC1A-204ENST00000463684 880 ntTSL 214.78□□□□□ -0.043e-7■□□□□ 10.9
SRSF1Q07955 KRT19-207ENST00000593096 728 ntTSL 314.6□□□□□ -0.074e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.58□□□□□ -0.084e-6■□□□□ 10.9
SRSF1Q07955 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.23□□□□□ -0.134e-6■□□□□ 10.9
SRSF1Q07955 KRT19-206ENST00000479031 427 ntTSL 214.13□□□□□ -0.154e-6■□□□□ 10.9
SRSF1Q07955 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.164e-6■□□□□ 10.9
SRSF1Q07955 POLR2A-207ENST00000576718 548 ntTSL 213.61□□□□□ -0.234e-6■□□□□ 10.9
SRSF1Q07955 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.24□□□□□ -0.294e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-211ENST00000588814 1719 ntTSL 212.9□□□□□ -0.344e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-216ENST00000589810 1058 ntTSL 1 (best)12.2□□□□□ -0.464e-6■□□□□ 10.9
SRSF1Q07955 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC11.86□□□□□ -0.514e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.51□□□□□ -0.574e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-213ENST00000589576 586 ntTSL 311.03□□□□□ -0.644e-6■□□□□ 10.9
SRSF1Q07955 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.674e-6■□□□□ 10.9
SRSF1Q07955 ACACA-235ENST00000614789 662 ntTSL 1 (best)10.89□□□□□ -0.672e-8■□□□□ 10.9
SRSF1Q07955 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.784e-6■□□□□ 10.9
SRSF1Q07955 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC9.87□□□□□ -0.834e-6■□□□□ 10.9
SRSF1Q07955 GAS8-205ENST00000561675 486 ntTSL 39.6□□□□□ -0.874e-6■□□□□ 10.9
SRSF1Q07955 GAS8-216ENST00000568664 341 ntTSL 59.52□□□□□ -0.894e-6■□□□□ 10.9
SRSF1Q07955 ACACA-246ENST00000621960 551 ntTSL 59.38□□□□□ -0.912e-8■□□□□ 10.9
SRSF1Q07955 DNAJC7-219ENST00000590774 544 ntTSL 49.35□□□□□ -0.914e-6■□□□□ 10.9
SRSF1Q07955 GAS8-214ENST00000566266 3174 ntTSL 1 (best)9.16□□□□□ -0.944e-6■□□□□ 10.9
SRSF1Q07955 UTP6-209ENST00000583408 1440 ntTSL 29□□□□□ -0.974e-6■□□□□ 10.9
SRSF1Q07955 DNAJC7-223ENST00000591787 566 ntTSL 48.59□□□□□ -1.034e-6■□□□□ 10.9
Retrieved 100 of 14,836 protein–RNA pairs in 27.9 ms