Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.78■□□□□ 0.76
CDR2Q01850 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.78■□□□□ 0.76
CDR2Q01850 AP000593.1-201ENST00000393668 712 ntBASIC19.78■□□□□ 0.76
CDR2Q01850 MIR1238-201ENST00000408483 83 ntBASIC19.78■□□□□ 0.76
CDR2Q01850 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.78■□□□□ 0.76
CDR2Q01850 AP003041.3-201ENST00000527151 707 ntBASIC19.78■□□□□ 0.76
CDR2Q01850 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.78■□□□□ 0.76
CDR2Q01850 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.78■□□□□ 0.76
CDR2Q01850 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 MIR4497-201ENST00000583208 89 ntBASIC19.78■□□□□ 0.76
CDR2Q01850 HCG11-201ENST00000411553 5696 ntBASIC19.78■□□□□ 0.76
CDR2Q01850 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
CDR2Q01850 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.78■□□□□ 0.76
CDR2Q01850 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.78■□□□□ 0.76
CDR2Q01850 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.78■□□□□ 0.76
CDR2Q01850 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.78■□□□□ 0.76
CDR2Q01850 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR2Q01850 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 AC092338.2-201ENST00000568827 1415 ntBASIC19.77■□□□□ 0.76
CDR2Q01850 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDR2Q01850 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CDR2Q01850 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.77■□□□□ 0.76
CDR2Q01850 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.77■□□□□ 0.76
CDR2Q01850 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDR2Q01850 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDR2Q01850 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
CDR2Q01850 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDR2Q01850 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CDR2Q01850 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.76■□□□□ 0.75
CDR2Q01850 ABALON-201ENST00000629058 1903 ntBASIC19.76■□□□□ 0.75
CDR2Q01850 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDR2Q01850 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 AC036111.1-201ENST00000533973 1582 ntBASIC19.76■□□□□ 0.75
CDR2Q01850 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.76■□□□□ 0.75
CDR2Q01850 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.76■□□□□ 0.75
CDR2Q01850 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CDR2Q01850 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.76■□□□□ 0.75
CDR2Q01850 CCR12P-201ENST00000446203 998 ntBASIC19.76■□□□□ 0.75
CDR2Q01850 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.76■□□□□ 0.75
CDR2Q01850 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.76■□□□□ 0.75
CDR2Q01850 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CDR2Q01850 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.76■□□□□ 0.75
CDR2Q01850 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDR2Q01850 KRT8P50-201ENST00000562022 1438 ntBASIC19.76■□□□□ 0.75
CDR2Q01850 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDR2Q01850 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDR2Q01850 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.75■□□□□ 0.75
CDR2Q01850 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDR2Q01850 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDR2Q01850 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.75■□□□□ 0.75
CDR2Q01850 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.75■□□□□ 0.75
CDR2Q01850 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDR2Q01850 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.75■□□□□ 0.75
CDR2Q01850 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.75■□□□□ 0.75
CDR2Q01850 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.75■□□□□ 0.75
CDR2Q01850 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms