Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
RPL39P62891 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.13□□□□□ -0.31
RPL39P62891 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RPL39P62891 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.13□□□□□ -0.31
RPL39P62891 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
RPL39P62891 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RPL39P62891 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
RPL39P62891 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
RPL39P62891 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RPL39P62891 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
RPL39P62891 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL39P62891 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RPL39P62891 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.12□□□□□ -0.31
RPL39P62891 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RPL39P62891 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.12□□□□□ -0.31
RPL39P62891 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.12□□□□□ -0.31
RPL39P62891 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.12□□□□□ -0.31
RPL39P62891 AC105036.2-201ENST00000569468 176 ntBASIC13.12□□□□□ -0.31
RPL39P62891 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 MIR6821-201ENST00000617625 74 ntBASIC13.12□□□□□ -0.31
RPL39P62891 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RPL39P62891 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.12□□□□□ -0.31
RPL39P62891 AC012317.2-201ENST00000623305 2251 ntBASIC13.12□□□□□ -0.31
RPL39P62891 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.12□□□□□ -0.31
RPL39P62891 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RPL39P62891 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RPL39P62891 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.12□□□□□ -0.31
RPL39P62891 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RPL39P62891 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL39P62891 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RPL39P62891 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.11□□□□□ -0.31
RPL39P62891 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RPL39P62891 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.11□□□□□ -0.31
RPL39P62891 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.11□□□□□ -0.31
RPL39P62891 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.11□□□□□ -0.31
RPL39P62891 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.11□□□□□ -0.31
RPL39P62891 AC080080.1-201ENST00000625121 2420 ntBASIC13.11□□□□□ -0.31
RPL39P62891 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RPL39P62891 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.11□□□□□ -0.31
RPL39P62891 AC004911.1-201ENST00000416316 871 ntBASIC13.11□□□□□ -0.31
RPL39P62891 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.11□□□□□ -0.31
RPL39P62891 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.11□□□□□ -0.31
RPL39P62891 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.11□□□□□ -0.31
RPL39P62891 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.11□□□□□ -0.31
RPL39P62891 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL39P62891 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.11□□□□□ -0.31
RPL39P62891 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.11□□□□□ -0.31
RPL39P62891 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RPL39P62891 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms