Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC009102.3-201ENST00000623118 1491 ntBASIC26.51■■□□□ 1.83
CLTCL1P53675 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC26.5■■□□□ 1.83
CLTCL1P53675 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
CLTCL1P53675 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
CLTCL1P53675 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC26.5■■□□□ 1.83
CLTCL1P53675 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC26.5■■□□□ 1.83
CLTCL1P53675 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CLTCL1P53675 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC26.49■■□□□ 1.83
CLTCL1P53675 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC26.49■■□□□ 1.83
CLTCL1P53675 SDHAP2-201ENST00000455183 2001 ntBASIC26.49■■□□□ 1.83
CLTCL1P53675 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLTCL1P53675 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLTCL1P53675 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC26.49■■□□□ 1.83
CLTCL1P53675 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC26.49■■□□□ 1.83
CLTCL1P53675 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLTCL1P53675 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC26.49■■□□□ 1.83
CLTCL1P53675 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLTCL1P53675 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CLTCL1P53675 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CLTCL1P53675 AL499627.1-201ENST00000569373 2188 ntBASIC26.48■■□□□ 1.83
CLTCL1P53675 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLTCL1P53675 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLTCL1P53675 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC26.48■■□□□ 1.83
CLTCL1P53675 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLTCL1P53675 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC26.48■■□□□ 1.83
CLTCL1P53675 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLTCL1P53675 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC26.48■■□□□ 1.83
CLTCL1P53675 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLTCL1P53675 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CLTCL1P53675 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLTCL1P53675 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CLTCL1P53675 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC26.48■■□□□ 1.83
CLTCL1P53675 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC26.47■■□□□ 1.83
CLTCL1P53675 CCS-201ENST00000310190 942 ntTSL 5 BASIC26.47■■□□□ 1.83
CLTCL1P53675 DFFB-203ENST00000341385 572 ntTSL 5 BASIC26.47■■□□□ 1.83
CLTCL1P53675 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC26.47■■□□□ 1.83
CLTCL1P53675 CALM3-211ENST00000598871 561 ntTSL 4 BASIC26.47■■□□□ 1.83
CLTCL1P53675 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 USP39-202ENST00000409025 1946 ntTSL 5 BASIC26.47■■□□□ 1.83
CLTCL1P53675 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC26.47■■□□□ 1.83
CLTCL1P53675 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC26.47■■□□□ 1.83
CLTCL1P53675 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
CLTCL1P53675 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CLTCL1P53675 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC26.47■■□□□ 1.83
CLTCL1P53675 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CLTCL1P53675 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC26.47■■□□□ 1.83
CLTCL1P53675 AL662844.1-201ENST00000546340 181 ntBASIC26.47■■□□□ 1.83
CLTCL1P53675 AC114341.1-201ENST00000618070 349 ntBASIC26.47■■□□□ 1.83
CLTCL1P53675 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLTCL1P53675 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLTCL1P53675 AC099343.3-201ENST00000605834 2503 ntBASIC26.46■■□□□ 1.83
CLTCL1P53675 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLTCL1P53675 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLTCL1P53675 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CLTCL1P53675 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLTCL1P53675 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
CLTCL1P53675 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CLTCL1P53675 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC26.46■■□□□ 1.83
CLTCL1P53675 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC26.46■■□□□ 1.83
CLTCL1P53675 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC26.46■■□□□ 1.83
CLTCL1P53675 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLTCL1P53675 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CLTCL1P53675 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
CLTCL1P53675 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CLTCL1P53675 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC26.45■■□□□ 1.83
CLTCL1P53675 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CLTCL1P53675 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
CLTCL1P53675 AC005332.7-201ENST00000614046 2005 ntBASIC26.45■■□□□ 1.82
CLTCL1P53675 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLTCL1P53675 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CLTCL1P53675 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CLTCL1P53675 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC26.45■■□□□ 1.82
CLTCL1P53675 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
CLTCL1P53675 PENK-208ENST00000523051 772 ntTSL 5 BASIC26.45■■□□□ 1.82
CLTCL1P53675 TPM1-218ENST00000559281 851 ntTSL 5 BASIC26.45■■□□□ 1.82
CLTCL1P53675 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC26.45■■□□□ 1.82
CLTCL1P53675 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC26.45■■□□□ 1.82
CLTCL1P53675 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC26.45■■□□□ 1.82
CLTCL1P53675 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC26.45■■□□□ 1.82
CLTCL1P53675 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms