Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBP50607 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
TUBP50607 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TUBP50607 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TUBP50607 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TUBP50607 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 HOXB1-202ENST00000577092 1414 ntBASIC19.52■□□□□ 0.72
TUBP50607 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.52■□□□□ 0.72
TUBP50607 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.52■□□□□ 0.72
TUBP50607 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.52■□□□□ 0.72
TUBP50607 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TUBP50607 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.52■□□□□ 0.72
TUBP50607 AC112497.1-201ENST00000624824 639 ntBASIC19.52■□□□□ 0.72
TUBP50607 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 AC008556.1-201ENST00000610908 2040 ntBASIC19.52■□□□□ 0.72
TUBP50607 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBP50607 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TUBP50607 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TUBP50607 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TUBP50607 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.51■□□□□ 0.71
TUBP50607 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TUBP50607 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.51■□□□□ 0.71
TUBP50607 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TUBP50607 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TUBP50607 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 SPDYE15P-201ENST00000424157 909 ntBASIC19.51■□□□□ 0.71
TUBP50607 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBP50607 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBP50607 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.51■□□□□ 0.71
TUBP50607 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TUBP50607 HYMAI.1-201ENST00000620949 238 ntBASIC19.51■□□□□ 0.71
TUBP50607 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.51■□□□□ 0.71
TUBP50607 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBP50607 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBP50607 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.51■□□□□ 0.71
TUBP50607 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBP50607 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 AC093503.3-201ENST00000624917 2352 ntBASIC19.5■□□□□ 0.71
TUBP50607 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.5■□□□□ 0.71
TUBP50607 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBP50607 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TUBP50607 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 MIR564-202ENST00000385049 94 ntBASIC19.5■□□□□ 0.71
TUBP50607 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBP50607 AC112907.2-201ENST00000448639 330 ntBASIC19.5■□□□□ 0.71
TUBP50607 RASA4DP-201ENST00000460726 1199 ntBASIC19.5■□□□□ 0.71
TUBP50607 SEC1P-202ENST00000473944 940 ntBASIC19.5■□□□□ 0.71
TUBP50607 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.5■□□□□ 0.71
TUBP50607 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBP50607 AC024243.1-201ENST00000609234 778 ntBASIC19.5■□□□□ 0.71
TUBP50607 AC068587.9-201ENST00000641814 219 ntBASIC19.5■□□□□ 0.71
TUBP50607 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TUBP50607 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TUBP50607 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBP50607 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TUBP50607 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBP50607 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBP50607 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBP50607 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TUBP50607 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.49■□□□□ 0.71
TUBP50607 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms