Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ARCN1P48444 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.59■□□□□ 0.57
ARCN1P48444 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.59■□□□□ 0.57
ARCN1P48444 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.59■□□□□ 0.57
ARCN1P48444 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARCN1P48444 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.59■□□□□ 0.57
ARCN1P48444 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.59■□□□□ 0.57
ARCN1P48444 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ARCN1P48444 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARCN1P48444 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ARCN1P48444 NOC2LP1-202ENST00000452600 2235 ntBASIC18.58■□□□□ 0.57
ARCN1P48444 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARCN1P48444 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ARCN1P48444 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ARCN1P48444 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARCN1P48444 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ARCN1P48444 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.58■□□□□ 0.56
ARCN1P48444 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.58■□□□□ 0.56
ARCN1P48444 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ARCN1P48444 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.58■□□□□ 0.56
ARCN1P48444 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.58■□□□□ 0.56
ARCN1P48444 AC010947.1-201ENST00000623454 693 ntBASIC18.58■□□□□ 0.56
ARCN1P48444 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARCN1P48444 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ARCN1P48444 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARCN1P48444 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.58■□□□□ 0.56
ARCN1P48444 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ARCN1P48444 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ARCN1P48444 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.58■□□□□ 0.56
ARCN1P48444 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARCN1P48444 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.58■□□□□ 0.56
ARCN1P48444 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ARCN1P48444 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ARCN1P48444 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ARCN1P48444 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARCN1P48444 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARCN1P48444 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.57■□□□□ 0.56
ARCN1P48444 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARCN1P48444 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.57■□□□□ 0.56
ARCN1P48444 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.57■□□□□ 0.56
ARCN1P48444 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.57■□□□□ 0.56
ARCN1P48444 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.57■□□□□ 0.56
ARCN1P48444 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.57■□□□□ 0.56
ARCN1P48444 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.57■□□□□ 0.56
ARCN1P48444 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARCN1P48444 NAPSB-206ENST00000562112 1266 ntBASIC18.57■□□□□ 0.56
ARCN1P48444 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.57■□□□□ 0.56
ARCN1P48444 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ARCN1P48444 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.57■□□□□ 0.56
ARCN1P48444 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.57■□□□□ 0.56
ARCN1P48444 AC135776.1-201ENST00000319817 2481 ntBASIC18.57■□□□□ 0.56
ARCN1P48444 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ARCN1P48444 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 AC034236.2-201ENST00000606662 1610 ntBASIC18.56■□□□□ 0.56
ARCN1P48444 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.56■□□□□ 0.56
ARCN1P48444 LINC01568-207ENST00000641790 1380 ntBASIC18.56■□□□□ 0.56
ARCN1P48444 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ARCN1P48444 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
ARCN1P48444 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.56■□□□□ 0.56
ARCN1P48444 SLC25A1P2-201ENST00000430693 912 ntBASIC18.56■□□□□ 0.56
ARCN1P48444 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.56■□□□□ 0.56
ARCN1P48444 KRT18P21-201ENST00000515767 1272 ntBASIC18.56■□□□□ 0.56
ARCN1P48444 AL353719.1-201ENST00000566847 864 ntBASIC18.56■□□□□ 0.56
ARCN1P48444 MIR3180-5-201ENST00000583743 153 ntBASIC18.56■□□□□ 0.56
ARCN1P48444 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.56■□□□□ 0.56
ARCN1P48444 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ARCN1P48444 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.56■□□□□ 0.56
ARCN1P48444 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 KRT8P50-201ENST00000562022 1438 ntBASIC18.56■□□□□ 0.56
ARCN1P48444 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ARCN1P48444 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.56■□□□□ 0.56
ARCN1P48444 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ARCN1P48444 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARCN1P48444 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ARCN1P48444 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARCN1P48444 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ARCN1P48444 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARCN1P48444 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ARCN1P48444 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms