Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC125634.1-201ENST00000438758 1403 ntBASIC21.12■□□□□ 0.97
TM4SF4P48230 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF4P48230 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.11■□□□□ 0.97
TM4SF4P48230 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.11■□□□□ 0.97
TM4SF4P48230 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF4P48230 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.11■□□□□ 0.97
TM4SF4P48230 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF4P48230 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.11■□□□□ 0.97
TM4SF4P48230 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.11■□□□□ 0.97
TM4SF4P48230 AC008687.5-201ENST00000593746 558 ntBASIC21.11■□□□□ 0.97
TM4SF4P48230 MTDHP4-201ENST00000600287 670 ntBASIC21.11■□□□□ 0.97
TM4SF4P48230 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.11■□□□□ 0.97
TM4SF4P48230 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF4P48230 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF4P48230 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF4P48230 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF4P48230 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.11■□□□□ 0.97
TM4SF4P48230 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF4P48230 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TM4SF4P48230 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TM4SF4P48230 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TM4SF4P48230 GABARAPL3-202ENST00000624044 1851 ntBASIC21.1■□□□□ 0.97
TM4SF4P48230 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TM4SF4P48230 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.1■□□□□ 0.97
TM4SF4P48230 NKAPP1-205ENST00000585790 367 ntBASIC21.1■□□□□ 0.97
TM4SF4P48230 AC092364.2-202ENST00000597012 1073 ntBASIC21.1■□□□□ 0.97
TM4SF4P48230 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.1■□□□□ 0.97
TM4SF4P48230 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
TM4SF4P48230 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TM4SF4P48230 TCF3P1-201ENST00000423021 1937 ntBASIC21.1■□□□□ 0.97
TM4SF4P48230 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TM4SF4P48230 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.09■□□□□ 0.97
TM4SF4P48230 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.09■□□□□ 0.97
TM4SF4P48230 MCCD1P2-201ENST00000423228 335 ntBASIC21.09■□□□□ 0.97
TM4SF4P48230 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
TM4SF4P48230 YBX1P5-201ENST00000509441 847 ntBASIC21.09■□□□□ 0.97
TM4SF4P48230 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.09■□□□□ 0.97
TM4SF4P48230 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.09■□□□□ 0.97
TM4SF4P48230 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.09■□□□□ 0.97
TM4SF4P48230 AC005829.1-201ENST00000570002 483 ntBASIC21.09■□□□□ 0.97
TM4SF4P48230 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.09■□□□□ 0.97
TM4SF4P48230 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.09■□□□□ 0.97
TM4SF4P48230 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.09■□□□□ 0.97
TM4SF4P48230 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.09■□□□□ 0.97
TM4SF4P48230 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF4P48230 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.08■□□□□ 0.97
TM4SF4P48230 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
TM4SF4P48230 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.08■□□□□ 0.97
TM4SF4P48230 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF4P48230 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF4P48230 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TM4SF4P48230 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF4P48230 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF4P48230 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.08■□□□□ 0.97
TM4SF4P48230 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF4P48230 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF4P48230 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.08■□□□□ 0.97
TM4SF4P48230 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.08■□□□□ 0.97
TM4SF4P48230 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.08■□□□□ 0.97
TM4SF4P48230 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.08■□□□□ 0.97
TM4SF4P48230 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.08■□□□□ 0.97
TM4SF4P48230 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.08■□□□□ 0.96
TM4SF4P48230 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF4P48230 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF4P48230 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF4P48230 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.08■□□□□ 0.96
TM4SF4P48230 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF4P48230 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF4P48230 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF4P48230 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF4P48230 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF4P48230 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.07■□□□□ 0.96
TM4SF4P48230 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.07■□□□□ 0.96
TM4SF4P48230 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF4P48230 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.07■□□□□ 0.96
TM4SF4P48230 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TM4SF4P48230 FAM8A3P-201ENST00000427218 844 ntBASIC21.07■□□□□ 0.96
TM4SF4P48230 MTCL1P1-201ENST00000446207 792 ntBASIC21.07■□□□□ 0.96
TM4SF4P48230 KRT18P41-201ENST00000518924 1277 ntBASIC21.07■□□□□ 0.96
TM4SF4P48230 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms