Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SOX6P35712 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX6P35712 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX6P35712 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX6P35712 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX6P35712 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SOX6P35712 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.64■□□□□ 0.26
SOX6P35712 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SOX6P35712 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SOX6P35712 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX6P35712 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
SOX6P35712 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SOX6P35712 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX6P35712 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.64■□□□□ 0.25
SOX6P35712 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX6P35712 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX6P35712 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX6P35712 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX6P35712 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX6P35712 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SOX6P35712 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SOX6P35712 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 TFP1-202ENST00000475455 1573 ntBASIC16.64■□□□□ 0.25
SOX6P35712 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SOX6P35712 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
SOX6P35712 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SOX6P35712 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX6P35712 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX6P35712 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.63■□□□□ 0.25
SOX6P35712 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SOX6P35712 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SOX6P35712 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.63■□□□□ 0.25
SOX6P35712 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX6P35712 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.63■□□□□ 0.25
SOX6P35712 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SOX6P35712 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SOX6P35712 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.63■□□□□ 0.25
SOX6P35712 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.63■□□□□ 0.25
SOX6P35712 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SOX6P35712 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
SOX6P35712 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SOX6P35712 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX6P35712 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SOX6P35712 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SOX6P35712 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX6P35712 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
SOX6P35712 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
SOX6P35712 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SOX6P35712 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX6P35712 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SOX6P35712 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SOX6P35712 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
SOX6P35712 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX6P35712 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX6P35712 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SOX6P35712 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.62■□□□□ 0.25
SOX6P35712 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms