Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PTPN7P35236 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PTPN7P35236 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN7P35236 LETM1P2-201ENST00000597330 2178 ntBASIC19.19■□□□□ 0.66
PTPN7P35236 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN7P35236 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN7P35236 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN7P35236 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN7P35236 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PTPN7P35236 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PTPN7P35236 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN7P35236 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PTPN7P35236 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTPN7P35236 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN7P35236 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.18■□□□□ 0.66
PTPN7P35236 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPN7P35236 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
PTPN7P35236 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN7P35236 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTPN7P35236 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN7P35236 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PTPN7P35236 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN7P35236 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN7P35236 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PTPN7P35236 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN7P35236 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PTPN7P35236 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.17■□□□□ 0.66
PTPN7P35236 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPN7P35236 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPN7P35236 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN7P35236 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.17■□□□□ 0.66
PTPN7P35236 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN7P35236 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PTPN7P35236 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN7P35236 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN7P35236 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PTPN7P35236 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN7P35236 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN7P35236 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN7P35236 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PTPN7P35236 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 AL133373.2-201ENST00000623187 2828 ntBASIC19.16■□□□□ 0.66
PTPN7P35236 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PTPN7P35236 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PTPN7P35236 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN7P35236 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 CRYGFP-201ENST00000418459 633 ntBASIC19.16■□□□□ 0.66
PTPN7P35236 AL158047.1-201ENST00000445918 881 ntBASIC19.16■□□□□ 0.66
PTPN7P35236 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PTPN7P35236 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.16■□□□□ 0.66
PTPN7P35236 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN7P35236 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN7P35236 AC026471.5-201ENST00000615068 467 ntBASIC19.16■□□□□ 0.66
PTPN7P35236 AL023803.3-201ENST00000615559 522 ntBASIC19.16■□□□□ 0.66
PTPN7P35236 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN7P35236 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN7P35236 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN7P35236 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN7P35236 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTPN7P35236 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN7P35236 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PTPN7P35236 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN7P35236 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPN7P35236 AC036111.1-201ENST00000533973 1582 ntBASIC19.15■□□□□ 0.66
PTPN7P35236 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN7P35236 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN7P35236 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN7P35236 AC020763.4-201ENST00000623414 4170 ntBASIC19.15■□□□□ 0.66
PTPN7P35236 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN7P35236 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN7P35236 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN7P35236 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms