Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 AC090616.6-201ENST00000582640 721 ntBASIC17.8■□□□□ 0.44
CCKBRP32239 AL121772.3-201ENST00000610840 674 ntBASIC17.8■□□□□ 0.44
CCKBRP32239 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCKBRP32239 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCKBRP32239 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCKBRP32239 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.8■□□□□ 0.44
CCKBRP32239 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCKBRP32239 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCKBRP32239 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCKBRP32239 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCKBRP32239 AC034236.2-201ENST00000606662 1610 ntBASIC17.8■□□□□ 0.44
CCKBRP32239 Z83836.1-201ENST00000624605 1642 ntBASIC17.8■□□□□ 0.44
CCKBRP32239 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.79■□□□□ 0.44
CCKBRP32239 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.79■□□□□ 0.44
CCKBRP32239 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.79■□□□□ 0.44
CCKBRP32239 FEM1AP3-201ENST00000403722 1741 ntBASIC17.79■□□□□ 0.44
CCKBRP32239 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.79■□□□□ 0.44
CCKBRP32239 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCKBRP32239 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.79■□□□□ 0.44
CCKBRP32239 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 AP000867.3-201ENST00000524675 377 ntBASIC17.79■□□□□ 0.44
CCKBRP32239 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.79■□□□□ 0.44
CCKBRP32239 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.79■□□□□ 0.44
CCKBRP32239 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.79■□□□□ 0.44
CCKBRP32239 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.79■□□□□ 0.44
CCKBRP32239 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCKBRP32239 KRT8P10-201ENST00000450021 1447 ntBASIC17.79■□□□□ 0.44
CCKBRP32239 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.79■□□□□ 0.44
CCKBRP32239 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.79■□□□□ 0.44
CCKBRP32239 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCKBRP32239 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.79■□□□□ 0.44
CCKBRP32239 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCKBRP32239 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCKBRP32239 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.78■□□□□ 0.44
CCKBRP32239 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.78■□□□□ 0.44
CCKBRP32239 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CCKBRP32239 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 TOB2P1-201ENST00000469761 992 ntBASIC17.78■□□□□ 0.44
CCKBRP32239 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.78■□□□□ 0.44
CCKBRP32239 AP003733.1-201ENST00000491725 852 ntBASIC17.78■□□□□ 0.44
CCKBRP32239 AL390719.2-201ENST00000606993 987 ntBASIC17.78■□□□□ 0.44
CCKBRP32239 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCKBRP32239 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.78■□□□□ 0.44
CCKBRP32239 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.78■□□□□ 0.44
CCKBRP32239 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.78■□□□□ 0.44
CCKBRP32239 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.78■□□□□ 0.44
CCKBRP32239 BCL2-203ENST00000589955 5011 ntBASIC17.78■□□□□ 0.44
CCKBRP32239 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CCKBRP32239 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCKBRP32239 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.77■□□□□ 0.44
CCKBRP32239 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.77■□□□□ 0.44
CCKBRP32239 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.77■□□□□ 0.44
CCKBRP32239 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCKBRP32239 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.77■□□□□ 0.44
CCKBRP32239 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
CCKBRP32239 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.77■□□□□ 0.44
CCKBRP32239 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CCKBRP32239 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.77■□□□□ 0.44
CCKBRP32239 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.77■□□□□ 0.44
CCKBRP32239 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCKBRP32239 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.77■□□□□ 0.44
CCKBRP32239 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.77■□□□□ 0.44
CCKBRP32239 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.77■□□□□ 0.44
CCKBRP32239 AC091304.2-201ENST00000564639 760 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms