Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A4P31645 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.63
SLC6A4P31645 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A4P31645 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A4P31645 MYLKP1-201ENST00000509077 1580 ntBASIC19.02■□□□□ 0.63
SLC6A4P31645 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC6A4P31645 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SLC6A4P31645 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC6A4P31645 UPK3BP1-201ENST00000428678 509 ntBASIC19.01■□□□□ 0.63
SLC6A4P31645 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC6A4P31645 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC6A4P31645 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC6A4P31645 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC6A4P31645 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC6A4P31645 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC6A4P31645 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC6A4P31645 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC6A4P31645 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A4P31645 AC005082.1-201ENST00000413042 2259 ntBASIC19■□□□□ 0.63
SLC6A4P31645 AC112777.1-201ENST00000540175 1423 ntBASIC19■□□□□ 0.63
SLC6A4P31645 AC018445.3-201ENST00000624177 1945 ntBASIC19■□□□□ 0.63
SLC6A4P31645 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19■□□□□ 0.63
SLC6A4P31645 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19■□□□□ 0.63
SLC6A4P31645 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19■□□□□ 0.63
SLC6A4P31645 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19■□□□□ 0.63
SLC6A4P31645 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19■□□□□ 0.63
SLC6A4P31645 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLC6A4P31645 AL162741.1-201ENST00000565563 1558 ntBASIC19■□□□□ 0.63
SLC6A4P31645 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A4P31645 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A4P31645 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A4P31645 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A4P31645 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC6A4P31645 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A4P31645 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC6A4P31645 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SLC6A4P31645 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A4P31645 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SLC6A4P31645 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A4P31645 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 MIR662-201ENST00000384847 95 ntBASIC18.99■□□□□ 0.63
SLC6A4P31645 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A4P31645 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A4P31645 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A4P31645 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC6A4P31645 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A4P31645 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SLC6A4P31645 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A4P31645 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC6A4P31645 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC6A4P31645 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SLC6A4P31645 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A4P31645 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC6A4P31645 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A4P31645 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A4P31645 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A4P31645 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC6A4P31645 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A4P31645 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC6A4P31645 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A4P31645 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.98■□□□□ 0.63
SLC6A4P31645 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC6A4P31645 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A4P31645 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC6A4P31645 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A4P31645 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC6A4P31645 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms