Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTPN1P18031 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
PTPN1P18031 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.62■□□□□ 0.73
PTPN1P18031 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 AL391807.1-203ENST00000604392 2365 ntBASIC19.62■□□□□ 0.73
PTPN1P18031 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN1P18031 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN1P18031 MYLKP1-201ENST00000509077 1580 ntBASIC19.61■□□□□ 0.73
PTPN1P18031 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 AC098818.2-201ENST00000564925 2320 ntBASIC19.61■□□□□ 0.73
PTPN1P18031 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN1P18031 SPDYE13P-201ENST00000445314 798 ntBASIC19.61■□□□□ 0.73
PTPN1P18031 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN1P18031 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN1P18031 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN1P18031 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN1P18031 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PTPN1P18031 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN1P18031 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
PTPN1P18031 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PTPN1P18031 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN1P18031 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN1P18031 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PTPN1P18031 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PTPN1P18031 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN1P18031 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
PTPN1P18031 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN1P18031 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 HLA-F-220ENST00000434407 884 ntBASIC19.6■□□□□ 0.73
PTPN1P18031 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPN1P18031 AL136038.3-201ENST00000561909 1096 ntBASIC19.6■□□□□ 0.73
PTPN1P18031 AC009065.1-201ENST00000564055 1225 ntBASIC19.6■□□□□ 0.73
PTPN1P18031 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPN1P18031 AL136038.4-201ENST00000603606 1261 ntBASIC19.6■□□□□ 0.73
PTPN1P18031 AL358472.4-201ENST00000633140 710 ntBASIC19.6■□□□□ 0.73
PTPN1P18031 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PTPN1P18031 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN1P18031 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN1P18031 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN1P18031 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PTPN1P18031 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTPN1P18031 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
PTPN1P18031 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PTPN1P18031 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 PVRIG2P-201ENST00000435460 978 ntBASIC19.59■□□□□ 0.73
PTPN1P18031 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PTPN1P18031 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN1P18031 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
PTPN1P18031 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTPN1P18031 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN1P18031 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN1P18031 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN1P18031 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN1P18031 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.58■□□□□ 0.73
PTPN1P18031 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN1P18031 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN1P18031 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.58■□□□□ 0.73
PTPN1P18031 AC005332.1-201ENST00000577698 1310 ntBASIC19.58■□□□□ 0.73
PTPN1P18031 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN1P18031 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN1P18031 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms