Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.5■□□□□ 0.39
CCL4P13236 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCL4P13236 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CCL4P13236 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL4P13236 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 AC099343.3-201ENST00000605834 2503 ntBASIC17.49■□□□□ 0.39
CCL4P13236 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CCL4P13236 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCL4P13236 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.49■□□□□ 0.39
CCL4P13236 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.49■□□□□ 0.39
CCL4P13236 AL121912.1-201ENST00000603683 238 ntBASIC17.49■□□□□ 0.39
CCL4P13236 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCL4P13236 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCL4P13236 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCL4P13236 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCL4P13236 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL4P13236 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL4P13236 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL4P13236 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CCL4P13236 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL4P13236 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL4P13236 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL4P13236 MRPL3P1-201ENST00000400109 1033 ntBASIC17.48■□□□□ 0.39
CCL4P13236 NUS1P2-201ENST00000417358 873 ntBASIC17.48■□□□□ 0.39
CCL4P13236 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL4P13236 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CCL4P13236 AC079776.4-201ENST00000511039 504 ntBASIC17.48■□□□□ 0.39
CCL4P13236 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL4P13236 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.48■□□□□ 0.39
CCL4P13236 SLC25A6P4-201ENST00000586535 553 ntBASIC17.48■□□□□ 0.39
CCL4P13236 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL4P13236 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.48■□□□□ 0.39
CCL4P13236 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.48■□□□□ 0.39
CCL4P13236 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL4P13236 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCL4P13236 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.48■□□□□ 0.39
CCL4P13236 KRT89P-201ENST00000620027 1478 ntBASIC17.48■□□□□ 0.39
CCL4P13236 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCL4P13236 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL4P13236 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL4P13236 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CCL4P13236 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCL4P13236 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.48■□□□□ 0.39
CCL4P13236 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL4P13236 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL4P13236 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL4P13236 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL4P13236 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 AL163051.1-201ENST00000569214 1512 ntBASIC17.47■□□□□ 0.39
CCL4P13236 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCL4P13236 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 AKR1C7P-201ENST00000305623 895 ntBASIC17.47■□□□□ 0.39
CCL4P13236 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CCL4P13236 VENTXP7-201ENST00000475503 772 ntBASIC17.47■□□□□ 0.39
CCL4P13236 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL4P13236 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL4P13236 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.47■□□□□ 0.39
CCL4P13236 AC011840.4-201ENST00000578471 627 ntBASIC17.47■□□□□ 0.39
CCL4P13236 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCL4P13236 AC004263.2-201ENST00000617183 678 ntBASIC17.47■□□□□ 0.39
CCL4P13236 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL4P13236 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCL4P13236 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL4P13236 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCL4P13236 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.47■□□□□ 0.39
CCL4P13236 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL4P13236 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL4P13236 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCL4P13236 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms