Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.16■□□□□ 0.34
UBL4AP11441 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.16■□□□□ 0.34
UBL4AP11441 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.16■□□□□ 0.34
UBL4AP11441 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 GPAT2P1-201ENST00000444924 1672 ntBASIC17.16■□□□□ 0.34
UBL4AP11441 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UBL4AP11441 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBL4AP11441 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
UBL4AP11441 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.15■□□□□ 0.34
UBL4AP11441 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UBL4AP11441 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBL4AP11441 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.15■□□□□ 0.34
UBL4AP11441 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.15■□□□□ 0.34
UBL4AP11441 TSPY17P-201ENST00000450329 467 ntBASIC17.15■□□□□ 0.34
UBL4AP11441 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.15■□□□□ 0.34
UBL4AP11441 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.15■□□□□ 0.34
UBL4AP11441 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.15■□□□□ 0.34
UBL4AP11441 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.15■□□□□ 0.34
UBL4AP11441 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.15■□□□□ 0.34
UBL4AP11441 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.15■□□□□ 0.34
UBL4AP11441 PCDHB18P-201ENST00000524813 2368 ntBASIC17.15■□□□□ 0.34
UBL4AP11441 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBL4AP11441 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.15■□□□□ 0.34
UBL4AP11441 AL357033.4-201ENST00000617703 1807 ntBASIC17.14■□□□□ 0.34
UBL4AP11441 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 WIZP1-201ENST00000531444 2299 ntBASIC17.14■□□□□ 0.33
UBL4AP11441 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
UBL4AP11441 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.14■□□□□ 0.33
UBL4AP11441 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
UBL4AP11441 TSPY15P-201ENST00000457163 923 ntBASIC17.14■□□□□ 0.33
UBL4AP11441 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.14■□□□□ 0.33
UBL4AP11441 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 AC008556.1-201ENST00000610908 2040 ntBASIC17.14■□□□□ 0.33
UBL4AP11441 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.14■□□□□ 0.33
UBL4AP11441 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.14■□□□□ 0.33
UBL4AP11441 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBL4AP11441 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.13■□□□□ 0.33
UBL4AP11441 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBL4AP11441 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.13■□□□□ 0.33
UBL4AP11441 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBL4AP11441 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.13■□□□□ 0.33
UBL4AP11441 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.13■□□□□ 0.33
UBL4AP11441 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.13■□□□□ 0.33
UBL4AP11441 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.13■□□□□ 0.33
UBL4AP11441 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.13■□□□□ 0.33
UBL4AP11441 AL023803.3-201ENST00000615559 522 ntBASIC17.13■□□□□ 0.33
UBL4AP11441 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.13■□□□□ 0.33
UBL4AP11441 AC116562.4-202ENST00000641738 218 ntBASIC17.13■□□□□ 0.33
UBL4AP11441 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.13■□□□□ 0.33
UBL4AP11441 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.13■□□□□ 0.33
UBL4AP11441 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBL4AP11441 AC012313.1-201ENST00000593393 3059 ntBASIC17.13■□□□□ 0.33
UBL4AP11441 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBL4AP11441 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.13■□□□□ 0.33
UBL4AP11441 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBL4AP11441 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBL4AP11441 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms