Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC172P0C7W6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC172P0C7W6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 RCC2P3-201ENST00000418112 1537 ntBASIC20.07■□□□□ 0.8
CCDC172P0C7W6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 AC008040.2-201ENST00000461049 708 ntBASIC20.07■□□□□ 0.8
CCDC172P0C7W6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC172P0C7W6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 AL354751.1-201ENST00000412768 1863 ntBASIC20.06■□□□□ 0.8
CCDC172P0C7W6 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.06■□□□□ 0.8
CCDC172P0C7W6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 AP001412.1-201ENST00000608405 714 ntBASIC20.06■□□□□ 0.8
CCDC172P0C7W6 DGCR10-201ENST00000609839 495 ntBASIC20.06■□□□□ 0.8
CCDC172P0C7W6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC172P0C7W6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 CD177P1-201ENST00000606252 935 ntBASIC20.05■□□□□ 0.8
CCDC172P0C7W6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 AL109659.2-201ENST00000606809 1674 ntBASIC20.05■□□□□ 0.8
CCDC172P0C7W6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC172P0C7W6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC172P0C7W6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms