Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.81■□□□□ 0.92
TPM3P06753 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM3P06753 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 MIR663A-201ENST00000385250 93 ntBASIC20.81■□□□□ 0.92
TPM3P06753 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM3P06753 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.81■□□□□ 0.92
TPM3P06753 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM3P06753 AL162430.1-201ENST00000480705 870 ntBASIC20.81■□□□□ 0.92
TPM3P06753 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.81■□□□□ 0.92
TPM3P06753 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.81■□□□□ 0.92
TPM3P06753 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.81■□□□□ 0.92
TPM3P06753 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.81■□□□□ 0.92
TPM3P06753 AC073111.5-205ENST00000641717 521 ntBASIC20.81■□□□□ 0.92
TPM3P06753 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM3P06753 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM3P06753 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TPM3P06753 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
TPM3P06753 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM3P06753 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM3P06753 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM3P06753 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TPM3P06753 AC135776.1-201ENST00000319817 2481 ntBASIC20.8■□□□□ 0.92
TPM3P06753 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TPM3P06753 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TPM3P06753 AC026271.2-201ENST00000428091 497 ntBASIC20.8■□□□□ 0.92
TPM3P06753 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM3P06753 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
TPM3P06753 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.8■□□□□ 0.92
TPM3P06753 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TPM3P06753 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.8■□□□□ 0.92
TPM3P06753 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.8■□□□□ 0.92
TPM3P06753 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TPM3P06753 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.8■□□□□ 0.92
TPM3P06753 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM3P06753 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TPM3P06753 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM3P06753 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM3P06753 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM3P06753 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM3P06753 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TPM3P06753 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM3P06753 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TPM3P06753 RARRES2P6-201ENST00000567333 442 ntBASIC20.79■□□□□ 0.92
TPM3P06753 AC022517.1-201ENST00000592429 346 ntBASIC20.79■□□□□ 0.92
TPM3P06753 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
TPM3P06753 MIR5787-201ENST00000611784 55 ntBASIC20.79■□□□□ 0.92
TPM3P06753 AC120498.8-201ENST00000614275 531 ntBASIC20.79■□□□□ 0.92
TPM3P06753 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.79■□□□□ 0.92
TPM3P06753 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TPM3P06753 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM3P06753 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TPM3P06753 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
TPM3P06753 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM3P06753 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TPM3P06753 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TPM3P06753 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM3P06753 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
TPM3P06753 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 AL645608.8-201ENST00000606034 2086 ntBASIC20.78■□□□□ 0.92
TPM3P06753 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM3P06753 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 AC026185.1-201ENST00000445748 174 ntBASIC20.78■□□□□ 0.92
TPM3P06753 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM3P06753 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.78■□□□□ 0.92
TPM3P06753 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM3P06753 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TPM3P06753 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM3P06753 PCDHA12-202ENST00000613593 2588 ntBASIC20.78■□□□□ 0.92
TPM3P06753 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TPM3P06753 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM3P06753 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TPM3P06753 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.77■□□□□ 0.92
TPM3P06753 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms