Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFAP04085 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFAP04085 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFAP04085 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFAP04085 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PDGFAP04085 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PDGFAP04085 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFAP04085 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFAP04085 AL162741.1-201ENST00000565563 1558 ntBASIC17.32■□□□□ 0.36
PDGFAP04085 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.32■□□□□ 0.36
PDGFAP04085 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PDGFAP04085 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
PDGFAP04085 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFAP04085 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PDGFAP04085 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFAP04085 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
PDGFAP04085 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.32■□□□□ 0.36
PDGFAP04085 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.32■□□□□ 0.36
PDGFAP04085 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.32■□□□□ 0.36
PDGFAP04085 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFAP04085 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 AL162377.1-201ENST00000618844 1793 ntBASIC17.32■□□□□ 0.36
PDGFAP04085 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFAP04085 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 AL032819.2-201ENST00000624543 2162 ntBASIC17.32■□□□□ 0.36
PDGFAP04085 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFAP04085 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFAP04085 SDHAP1-207ENST00000440850 2000 ntBASIC17.31■□□□□ 0.36
PDGFAP04085 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFAP04085 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFAP04085 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PDGFAP04085 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFAP04085 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFAP04085 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFAP04085 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFAP04085 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFAP04085 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PDGFAP04085 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.31■□□□□ 0.36
PDGFAP04085 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PDGFAP04085 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFAP04085 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFAP04085 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFAP04085 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFAP04085 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFAP04085 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFAP04085 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDGFAP04085 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 ZNF815P-204ENST00000434898 1737 ntBASIC17.3■□□□□ 0.36
PDGFAP04085 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.3■□□□□ 0.36
PDGFAP04085 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFAP04085 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDGFAP04085 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFAP04085 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.3■□□□□ 0.36
PDGFAP04085 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFAP04085 AC009078.2-202ENST00000463353 338 ntBASIC17.3■□□□□ 0.36
PDGFAP04085 SEC1P-202ENST00000473944 940 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms