Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTAP01374 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LTAP01374 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.98□□□□□ -0.17
LTAP01374 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.98□□□□□ -0.17
LTAP01374 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTAP01374 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.98□□□□□ -0.17
LTAP01374 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTAP01374 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LTAP01374 KRT8P3-201ENST00000519669 1449 ntBASIC13.98□□□□□ -0.17
LTAP01374 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LTAP01374 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LTAP01374 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.97□□□□□ -0.17
LTAP01374 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 MYLKP1-201ENST00000509077 1580 ntBASIC13.97□□□□□ -0.17
LTAP01374 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LTAP01374 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LTAP01374 AC004911.1-201ENST00000416316 871 ntBASIC13.97□□□□□ -0.17
LTAP01374 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.97□□□□□ -0.17
LTAP01374 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.97□□□□□ -0.17
LTAP01374 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.97□□□□□ -0.17
LTAP01374 C1QL1P1-201ENST00000568105 661 ntBASIC13.97□□□□□ -0.17
LTAP01374 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.97□□□□□ -0.17
LTAP01374 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.97□□□□□ -0.17
LTAP01374 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LTAP01374 AC108860.2-201ENST00000562760 2183 ntBASIC13.97□□□□□ -0.17
LTAP01374 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.97□□□□□ -0.17
LTAP01374 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.97□□□□□ -0.17
LTAP01374 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LTAP01374 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.96□□□□□ -0.17
LTAP01374 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
LTAP01374 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.96□□□□□ -0.17
LTAP01374 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.96□□□□□ -0.17
LTAP01374 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LTAP01374 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.96□□□□□ -0.17
LTAP01374 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.96□□□□□ -0.17
LTAP01374 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LTAP01374 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.96□□□□□ -0.17
LTAP01374 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.96□□□□□ -0.17
LTAP01374 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.96□□□□□ -0.17
LTAP01374 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 MIPEPP3-201ENST00000412105 444 ntBASIC13.96□□□□□ -0.17
LTAP01374 POU5F1P3-201ENST00000428824 1078 ntBASIC13.96□□□□□ -0.17
LTAP01374 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.96□□□□□ -0.17
LTAP01374 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.96□□□□□ -0.17
LTAP01374 AC091874.3-201ENST00000512672 1195 ntBASIC13.96□□□□□ -0.17
LTAP01374 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
LTAP01374 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.96□□□□□ -0.17
LTAP01374 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.96□□□□□ -0.17
LTAP01374 AC092118.2-201ENST00000613495 667 ntBASIC13.96□□□□□ -0.17
LTAP01374 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LTAP01374 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LTAP01374 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LTAP01374 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LTAP01374 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
LTAP01374 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LTAP01374 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LTAP01374 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.96□□□□□ -0.18
LTAP01374 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LTAP01374 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.96□□□□□ -0.18
LTAP01374 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LTAP01374 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.96□□□□□ -0.18
LTAP01374 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LTAP01374 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LTAP01374 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LTAP01374 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms