Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LCA5LO95447 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.72■□□□□ 0.75
LCA5LO95447 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LCA5LO95447 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
LCA5LO95447 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.72■□□□□ 0.75
LCA5LO95447 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.72■□□□□ 0.75
LCA5LO95447 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.72■□□□□ 0.75
LCA5LO95447 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.72■□□□□ 0.75
LCA5LO95447 AF186192.3-201ENST00000583427 947 ntBASIC19.72■□□□□ 0.75
LCA5LO95447 AP000692.2-201ENST00000608391 879 ntBASIC19.72■□□□□ 0.75
LCA5LO95447 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LCA5LO95447 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.72■□□□□ 0.75
LCA5LO95447 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.72■□□□□ 0.75
LCA5LO95447 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LCA5LO95447 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.71■□□□□ 0.75
LCA5LO95447 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LCA5LO95447 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LCA5LO95447 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
LCA5LO95447 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.71■□□□□ 0.75
LCA5LO95447 AC073195.1-201ENST00000607241 877 ntBASIC19.71■□□□□ 0.75
LCA5LO95447 AC034236.2-201ENST00000606662 1610 ntBASIC19.71■□□□□ 0.75
LCA5LO95447 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LCA5LO95447 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LCA5LO95447 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.71■□□□□ 0.75
LCA5LO95447 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.71■□□□□ 0.75
LCA5LO95447 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
LCA5LO95447 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LCA5LO95447 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LCA5LO95447 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LCA5LO95447 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LCA5LO95447 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.7■□□□□ 0.74
LCA5LO95447 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LCA5LO95447 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LCA5LO95447 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.7■□□□□ 0.74
LCA5LO95447 GPAT2P1-201ENST00000444924 1672 ntBASIC19.7■□□□□ 0.74
LCA5LO95447 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.7■□□□□ 0.74
LCA5LO95447 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LCA5LO95447 AC096733.2-201ENST00000609937 1394 ntBASIC19.7■□□□□ 0.74
LCA5LO95447 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.7■□□□□ 0.74
LCA5LO95447 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.7■□□□□ 0.74
LCA5LO95447 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCA5LO95447 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LCA5LO95447 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LCA5LO95447 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.69■□□□□ 0.74
LCA5LO95447 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCA5LO95447 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.69■□□□□ 0.74
LCA5LO95447 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.69■□□□□ 0.74
LCA5LO95447 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCA5LO95447 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.69■□□□□ 0.74
LCA5LO95447 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.69■□□□□ 0.74
LCA5LO95447 RARRES2P10-201ENST00000564312 460 ntBASIC19.69■□□□□ 0.74
LCA5LO95447 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.69■□□□□ 0.74
LCA5LO95447 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LCA5LO95447 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.69■□□□□ 0.74
LCA5LO95447 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LCA5LO95447 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.69■□□□□ 0.74
LCA5LO95447 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.69■□□□□ 0.74
LCA5LO95447 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
LCA5LO95447 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCA5LO95447 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LCA5LO95447 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.69■□□□□ 0.74
LCA5LO95447 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LCA5LO95447 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms