Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC27.73■■■□□ 2.03
RAPGEF3O95398 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC27.73■■■□□ 2.03
RAPGEF3O95398 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 AC092364.2-202ENST00000597012 1073 ntBASIC27.73■■■□□ 2.03
RAPGEF3O95398 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC27.73■■■□□ 2.03
RAPGEF3O95398 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RAPGEF3O95398 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF3O95398 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC27.72■■■□□ 2.03
RAPGEF3O95398 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC27.72■■■□□ 2.03
RAPGEF3O95398 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF3O95398 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF3O95398 LINC00565-201ENST00000562710 2331 ntBASIC27.72■■■□□ 2.03
RAPGEF3O95398 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF3O95398 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC27.72■■■□□ 2.03
RAPGEF3O95398 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC27.72■■■□□ 2.03
RAPGEF3O95398 AC107918.4-202ENST00000641623 219 ntBASIC27.72■■■□□ 2.03
RAPGEF3O95398 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF3O95398 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF3O95398 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC27.72■■■□□ 2.03
RAPGEF3O95398 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RAPGEF3O95398 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC27.71■■■□□ 2.03
RAPGEF3O95398 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC27.71■■■□□ 2.03
RAPGEF3O95398 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF3O95398 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF3O95398 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF3O95398 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC27.71■■■□□ 2.03
RAPGEF3O95398 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF3O95398 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC27.71■■■□□ 2.03
RAPGEF3O95398 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC27.71■■■□□ 2.03
RAPGEF3O95398 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF3O95398 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF3O95398 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF3O95398 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF3O95398 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC27.71■■■□□ 2.03
RAPGEF3O95398 AC012676.1-201ENST00000574705 1949 ntBASIC27.71■■■□□ 2.03
RAPGEF3O95398 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RAPGEF3O95398 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
RAPGEF3O95398 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
RAPGEF3O95398 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC27.7■■■□□ 2.03
RAPGEF3O95398 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
RAPGEF3O95398 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC27.7■■■□□ 2.03
RAPGEF3O95398 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RAPGEF3O95398 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC27.7■■■□□ 2.02
RAPGEF3O95398 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC27.7■■■□□ 2.02
RAPGEF3O95398 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
RAPGEF3O95398 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
RAPGEF3O95398 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC27.7■■■□□ 2.02
RAPGEF3O95398 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC27.7■■■□□ 2.02
RAPGEF3O95398 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC27.7■■■□□ 2.02
RAPGEF3O95398 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RAPGEF3O95398 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RAPGEF3O95398 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC27.7■■■□□ 2.02
RAPGEF3O95398 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF3O95398 TCF3P1-201ENST00000423021 1937 ntBASIC27.69■■■□□ 2.02
RAPGEF3O95398 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF3O95398 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF3O95398 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF3O95398 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC27.69■■■□□ 2.02
RAPGEF3O95398 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC27.69■■■□□ 2.02
RAPGEF3O95398 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF3O95398 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF3O95398 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF3O95398 BEX3-201ENST00000361298 921 ntTSL 2 BASIC27.69■■■□□ 2.02
RAPGEF3O95398 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF3O95398 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC27.69■■■□□ 2.02
RAPGEF3O95398 PON3-203ENST00000427422 894 ntTSL 3 BASIC27.69■■■□□ 2.02
RAPGEF3O95398 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC27.69■■■□□ 2.02
RAPGEF3O95398 YBX1P5-201ENST00000509441 847 ntBASIC27.69■■■□□ 2.02
RAPGEF3O95398 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC27.69■■■□□ 2.02
RAPGEF3O95398 NKAPP1-205ENST00000585790 367 ntBASIC27.69■■■□□ 2.02
RAPGEF3O95398 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RAPGEF3O95398 MTDHP4-201ENST00000600287 670 ntBASIC27.69■■■□□ 2.02
RAPGEF3O95398 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF3O95398 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF3O95398 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF3O95398 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC27.68■■■□□ 2.02
RAPGEF3O95398 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF3O95398 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC27.68■■■□□ 2.02
RAPGEF3O95398 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF3O95398 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
RAPGEF3O95398 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC27.68■■■□□ 2.02
RAPGEF3O95398 DANCR-204ENST00000444958 709 ntTSL 3 BASIC27.68■■■□□ 2.02
RAPGEF3O95398 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC27.68■■■□□ 2.02
RAPGEF3O95398 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
RAPGEF3O95398 CFL1-202ENST00000524553 860 ntTSL 2 BASIC27.68■■■□□ 2.02
RAPGEF3O95398 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF3O95398 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC27.68■■■□□ 2.02
RAPGEF3O95398 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RAPGEF3O95398 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RAPGEF3O95398 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
RAPGEF3O95398 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RAPGEF3O95398 KIRREL3-AS3-201ENST00000404882 831 ntBASIC27.67■■■□□ 2.02
RAPGEF3O95398 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
RAPGEF3O95398 CYGB-205ENST00000590175 830 ntTSL 3 BASIC27.67■■■□□ 2.02
RAPGEF3O95398 COPE-211ENST00000600932 1144 ntTSL 5 BASIC27.67■■■□□ 2.02
RAPGEF3O95398 AL139288.1-201ENST00000623748 933 ntBASIC27.67■■■□□ 2.02
RAPGEF3O95398 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC27.67■■■□□ 2.02
RAPGEF3O95398 AC068587.9-201ENST00000641814 219 ntBASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms