Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP1O94782 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.79■□□□□ 0.6
USP1O94782 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.79■□□□□ 0.6
USP1O94782 CD177P1-201ENST00000606252 935 ntBASIC18.79■□□□□ 0.6
USP1O94782 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.79■□□□□ 0.6
USP1O94782 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
USP1O94782 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 AC096733.2-201ENST00000609937 1394 ntBASIC18.79■□□□□ 0.6
USP1O94782 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
USP1O94782 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
USP1O94782 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 AL109659.2-201ENST00000606809 1674 ntBASIC18.79■□□□□ 0.6
USP1O94782 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP1O94782 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
USP1O94782 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.78■□□□□ 0.6
USP1O94782 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.78■□□□□ 0.6
USP1O94782 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.78■□□□□ 0.6
USP1O94782 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP1O94782 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP1O94782 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.78■□□□□ 0.6
USP1O94782 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.78■□□□□ 0.6
USP1O94782 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.78■□□□□ 0.6
USP1O94782 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
USP1O94782 DGCR10-201ENST00000609839 495 ntBASIC18.78■□□□□ 0.6
USP1O94782 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
USP1O94782 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
USP1O94782 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.78■□□□□ 0.6
USP1O94782 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
USP1O94782 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP1O94782 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.78■□□□□ 0.6
USP1O94782 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.77■□□□□ 0.6
USP1O94782 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 MIR718-201ENST00000390190 70 ntBASIC18.77■□□□□ 0.6
USP1O94782 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
USP1O94782 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.77■□□□□ 0.6
USP1O94782 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.77■□□□□ 0.6
USP1O94782 AC116562.2-201ENST00000507042 360 ntBASIC18.77■□□□□ 0.6
USP1O94782 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.77■□□□□ 0.6
USP1O94782 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
USP1O94782 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.77■□□□□ 0.6
USP1O94782 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.77■□□□□ 0.6
USP1O94782 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
USP1O94782 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.77■□□□□ 0.6
USP1O94782 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.77■□□□□ 0.6
USP1O94782 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.77■□□□□ 0.6
USP1O94782 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
USP1O94782 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP1O94782 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.77■□□□□ 0.6
USP1O94782 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP1O94782 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP1O94782 NOC2LP1-202ENST00000452600 2235 ntBASIC18.77■□□□□ 0.59
USP1O94782 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP1O94782 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.77■□□□□ 0.59
USP1O94782 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
USP1O94782 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP1O94782 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.77■□□□□ 0.59
USP1O94782 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.76■□□□□ 0.59
USP1O94782 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
USP1O94782 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
USP1O94782 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP1O94782 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP1O94782 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP1O94782 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP1O94782 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.76■□□□□ 0.59
USP1O94782 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP1O94782 AC008550.1-201ENST00000511500 884 ntBASIC18.76■□□□□ 0.59
USP1O94782 NUDT16P1-203ENST00000513809 620 ntBASIC18.76■□□□□ 0.59
USP1O94782 KRT18P41-201ENST00000518924 1277 ntBASIC18.76■□□□□ 0.59
USP1O94782 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms