Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC25.63■■□□□ 1.69
BRD4O60885 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC25.63■■□□□ 1.69
BRD4O60885 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
BRD4O60885 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
BRD4O60885 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC25.63■■□□□ 1.69
BRD4O60885 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC25.63■■□□□ 1.69
BRD4O60885 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC25.63■■□□□ 1.69
BRD4O60885 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
BRD4O60885 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC25.62■■□□□ 1.69
BRD4O60885 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
BRD4O60885 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC25.62■■□□□ 1.69
BRD4O60885 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC25.62■■□□□ 1.69
BRD4O60885 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
BRD4O60885 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
BRD4O60885 AL512353.2-201ENST00000448759 1962 ntBASIC25.62■■□□□ 1.69
BRD4O60885 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC25.62■■□□□ 1.69
BRD4O60885 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC25.62■■□□□ 1.69
BRD4O60885 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
BRD4O60885 MIR3180-4-201ENST00000582223 153 ntBASIC25.62■■□□□ 1.69
BRD4O60885 TBCB-205ENST00000585746 875 ntTSL 3 BASIC25.62■■□□□ 1.69
BRD4O60885 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
BRD4O60885 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
BRD4O60885 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC25.62■■□□□ 1.69
BRD4O60885 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
BRD4O60885 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
BRD4O60885 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
BRD4O60885 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
BRD4O60885 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
BRD4O60885 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
BRD4O60885 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC25.62■■□□□ 1.69
BRD4O60885 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 AC246785.2-201ENST00000432512 513 ntBASIC25.61■■□□□ 1.69
BRD4O60885 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC25.61■■□□□ 1.69
BRD4O60885 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC25.61■■□□□ 1.69
BRD4O60885 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
BRD4O60885 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRD4O60885 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
BRD4O60885 TSPY22P-201ENST00000427496 604 ntBASIC25.6■■□□□ 1.69
BRD4O60885 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.6■■□□□ 1.69
BRD4O60885 CIB2-208ENST00000560618 804 ntTSL 2 BASIC25.6■■□□□ 1.69
BRD4O60885 AC010240.3-201ENST00000607688 395 ntBASIC25.6■■□□□ 1.69
BRD4O60885 LITAF-220ENST00000620789 692 ntTSL 5 BASIC25.6■■□□□ 1.69
BRD4O60885 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
BRD4O60885 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
BRD4O60885 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
BRD4O60885 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
BRD4O60885 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
BRD4O60885 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
BRD4O60885 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC25.6■■□□□ 1.69
BRD4O60885 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
BRD4O60885 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
BRD4O60885 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
BRD4O60885 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC25.6■■□□□ 1.69
BRD4O60885 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
BRD4O60885 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC25.59■■□□□ 1.69
BRD4O60885 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC25.59■■□□□ 1.69
BRD4O60885 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC25.59■■□□□ 1.69
BRD4O60885 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC25.59■■□□□ 1.69
BRD4O60885 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC25.59■■□□□ 1.69
BRD4O60885 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC25.59■■□□□ 1.69
BRD4O60885 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC25.59■■□□□ 1.69
BRD4O60885 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC25.59■■□□□ 1.69
BRD4O60885 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
BRD4O60885 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
BRD4O60885 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC25.58■■□□□ 1.69
BRD4O60885 Z98044.1-201ENST00000632503 1764 ntBASIC25.58■■□□□ 1.69
BRD4O60885 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC25.58■■□□□ 1.69
BRD4O60885 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BRD4O60885 TSPY19P-201ENST00000418461 509 ntBASIC25.58■■□□□ 1.69
BRD4O60885 TSPY18P-201ENST00000441642 509 ntBASIC25.58■■□□□ 1.69
BRD4O60885 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC25.58■■□□□ 1.69
BRD4O60885 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC25.58■■□□□ 1.69
BRD4O60885 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
BRD4O60885 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
BRD4O60885 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BRD4O60885 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BRD4O60885 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
BRD4O60885 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BRD4O60885 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms