Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CYTH3O43739 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CYTH3O43739 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.31■■□□□ 1
CYTH3O43739 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.31■■□□□ 1
CYTH3O43739 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CYTH3O43739 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CYTH3O43739 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CYTH3O43739 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.31■■□□□ 1
CYTH3O43739 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.3■■□□□ 1
CYTH3O43739 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CYTH3O43739 WIZP1-201ENST00000531444 2299 ntBASIC21.3■■□□□ 1
CYTH3O43739 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.3■■□□□ 1
CYTH3O43739 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.3■■□□□ 1
CYTH3O43739 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.3■■□□□ 1
CYTH3O43739 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CYTH3O43739 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.3■■□□□ 1
CYTH3O43739 AC116407.4-201ENST00000623319 1061 ntBASIC21.3■■□□□ 1
CYTH3O43739 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.3■■□□□ 1
CYTH3O43739 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CYTH3O43739 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYTH3O43739 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CYTH3O43739 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYTH3O43739 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.29■■□□□ 1
CYTH3O43739 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYTH3O43739 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYTH3O43739 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CYTH3O43739 MIR662-201ENST00000384847 95 ntBASIC21.29■■□□□ 1
CYTH3O43739 MIR149-201ENST00000384879 89 ntBASIC21.29■■□□□ 1
CYTH3O43739 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.29■■□□□ 1
CYTH3O43739 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.29■■□□□ 1
CYTH3O43739 PCED1CP-201ENST00000419887 785 ntBASIC21.29■■□□□ 1
CYTH3O43739 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYTH3O43739 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.29■■□□□ 1
CYTH3O43739 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.29■■□□□ 1
CYTH3O43739 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.29■■□□□ 1
CYTH3O43739 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.29■■□□□ 1
CYTH3O43739 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
CYTH3O43739 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.29■■□□□ 1
CYTH3O43739 AL138781.2-201ENST00000617896 1843 ntBASIC21.29■■□□□ 1
CYTH3O43739 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CYTH3O43739 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.29■■□□□ 1
CYTH3O43739 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.29■■□□□ 1
CYTH3O43739 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.29■■□□□ 1
CYTH3O43739 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYTH3O43739 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CYTH3O43739 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.28■■□□□ 1
CYTH3O43739 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 AC009102.3-201ENST00000623118 1491 ntBASIC21.28■■□□□ 1
CYTH3O43739 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.28■■□□□ 1
CYTH3O43739 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.28■■□□□ 1
CYTH3O43739 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.28■■□□□ 1
CYTH3O43739 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CYTH3O43739 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CYTH3O43739 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.28■■□□□ 1
CYTH3O43739 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CYTH3O43739 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.28■■□□□ 1
CYTH3O43739 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CYTH3O43739 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.28■■□□□ 1
CYTH3O43739 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.28■■□□□ 1
CYTH3O43739 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.28■■□□□ 1
CYTH3O43739 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CYTH3O43739 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.28■■□□□ 1
CYTH3O43739 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYTH3O43739 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.28■■□□□ 1
CYTH3O43739 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.27■■□□□ 1
CYTH3O43739 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CYTH3O43739 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CYTH3O43739 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.27■■□□□ 1
CYTH3O43739 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CYTH3O43739 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.27■■□□□ 1
CYTH3O43739 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.27■■□□□ 1
CYTH3O43739 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.27■■□□□ 1
CYTH3O43739 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.27■■□□□ 1
CYTH3O43739 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.27■■□□□ 1
CYTH3O43739 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.27■■□□□ 1
CYTH3O43739 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CYTH3O43739 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CYTH3O43739 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms