Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF13O43567 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF13O43567 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF13O43567 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RNF13O43567 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RNF13O43567 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF13O43567 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF13O43567 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF13O43567 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF13O43567 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF13O43567 AC020916.1-201ENST00000587762 1774 ntBASIC16.92■□□□□ 0.3
RNF13O43567 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF13O43567 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF13O43567 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF13O43567 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF13O43567 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF13O43567 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF13O43567 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 ABALON-201ENST00000629058 1903 ntBASIC16.91■□□□□ 0.3
RNF13O43567 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RNF13O43567 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF13O43567 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF13O43567 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF13O43567 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF13O43567 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 HEIH-201ENST00000623091 1652 ntBASIC16.91■□□□□ 0.3
RNF13O43567 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RNF13O43567 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RNF13O43567 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF13O43567 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF13O43567 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
RNF13O43567 KRT8P3-201ENST00000519669 1449 ntBASIC16.9■□□□□ 0.3
RNF13O43567 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF13O43567 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
RNF13O43567 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF13O43567 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RNF13O43567 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF13O43567 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RNF13O43567 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.9■□□□□ 0.3
RNF13O43567 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF13O43567 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNF13O43567 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF13O43567 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF13O43567 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
RNF13O43567 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF13O43567 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF13O43567 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF13O43567 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNF13O43567 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
RNF13O43567 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF13O43567 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF13O43567 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RNF13O43567 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
RNF13O43567 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RNF13O43567 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF13O43567 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF13O43567 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF13O43567 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF13O43567 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF13O43567 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF13O43567 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF13O43567 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF13O43567 AC012618.2-201ENST00000428058 849 ntBASIC16.89■□□□□ 0.29
RNF13O43567 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF13O43567 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RNF13O43567 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms