Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXA2O43364 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.83■□□□□ 0.77
HOXA2O43364 AC079781.3-201ENST00000449110 356 ntBASIC19.83■□□□□ 0.77
HOXA2O43364 MINOS1P3-201ENST00000457048 203 ntBASIC19.83■□□□□ 0.77
HOXA2O43364 AC009078.2-202ENST00000463353 338 ntBASIC19.83■□□□□ 0.77
HOXA2O43364 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXA2O43364 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXA2O43364 AL121912.1-201ENST00000603683 238 ntBASIC19.83■□□□□ 0.77
HOXA2O43364 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXA2O43364 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HOXA2O43364 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.83■□□□□ 0.77
HOXA2O43364 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXA2O43364 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
HOXA2O43364 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.83■□□□□ 0.76
HOXA2O43364 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
HOXA2O43364 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.83■□□□□ 0.76
HOXA2O43364 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
HOXA2O43364 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HOXA2O43364 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA2O43364 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA2O43364 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HOXA2O43364 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA2O43364 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA2O43364 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXA2O43364 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HOXA2O43364 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA2O43364 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA2O43364 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
HOXA2O43364 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXA2O43364 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA2O43364 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HOXA2O43364 POM121L3P-201ENST00000419331 1163 ntBASIC19.82■□□□□ 0.76
HOXA2O43364 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.82■□□□□ 0.76
HOXA2O43364 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.82■□□□□ 0.76
HOXA2O43364 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXA2O43364 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.82■□□□□ 0.76
HOXA2O43364 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.82■□□□□ 0.76
HOXA2O43364 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
HOXA2O43364 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.82■□□□□ 0.76
HOXA2O43364 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXA2O43364 AC083906.6-201ENST00000641366 219 ntBASIC19.82■□□□□ 0.76
HOXA2O43364 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA2O43364 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOXA2O43364 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXA2O43364 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA2O43364 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HOXA2O43364 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXA2O43364 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA2O43364 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HOXA2O43364 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA2O43364 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HOXA2O43364 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA2O43364 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA2O43364 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA2O43364 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HOXA2O43364 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA2O43364 AC113404.2-201ENST00000507884 177 ntBASIC19.81■□□□□ 0.76
HOXA2O43364 AC106795.1-205ENST00000512851 1056 ntBASIC19.81■□□□□ 0.76
HOXA2O43364 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA2O43364 AP002469.2-201ENST00000531724 424 ntBASIC19.81■□□□□ 0.76
HOXA2O43364 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA2O43364 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HOXA2O43364 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HOXA2O43364 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HOXA2O43364 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXA2O43364 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXA2O43364 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
HOXA2O43364 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXA2O43364 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXA2O43364 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HOXA2O43364 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXA2O43364 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXA2O43364 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.8■□□□□ 0.76
HOXA2O43364 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.8■□□□□ 0.76
HOXA2O43364 AC004263.2-201ENST00000617183 678 ntBASIC19.8■□□□□ 0.76
HOXA2O43364 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HOXA2O43364 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOXA2O43364 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA2O43364 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HOXA2O43364 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXA2O43364 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms