Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PFDN6O15212 AC090164.3-201ENST00000610780 2143 ntBASIC18.6■□□□□ 0.57
PFDN6O15212 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.6■□□□□ 0.57
PFDN6O15212 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.6■□□□□ 0.57
PFDN6O15212 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.6■□□□□ 0.57
PFDN6O15212 AL357033.4-201ENST00000617703 1807 ntBASIC18.6■□□□□ 0.57
PFDN6O15212 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.6■□□□□ 0.57
PFDN6O15212 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN6O15212 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PFDN6O15212 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.6■□□□□ 0.57
PFDN6O15212 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.59■□□□□ 0.57
PFDN6O15212 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PFDN6O15212 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 CCR12P-201ENST00000446203 998 ntBASIC18.59■□□□□ 0.57
PFDN6O15212 TSPY17P-201ENST00000450329 467 ntBASIC18.59■□□□□ 0.57
PFDN6O15212 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.59■□□□□ 0.57
PFDN6O15212 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PFDN6O15212 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PFDN6O15212 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN6O15212 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PFDN6O15212 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PFDN6O15212 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PFDN6O15212 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PFDN6O15212 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PFDN6O15212 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.58■□□□□ 0.57
PFDN6O15212 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.58■□□□□ 0.57
PFDN6O15212 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.58■□□□□ 0.56
PFDN6O15212 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.58■□□□□ 0.56
PFDN6O15212 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 TSPY7P-201ENST00000431358 1114 ntBASIC18.58■□□□□ 0.56
PFDN6O15212 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 RBM17P1-201ENST00000453646 1190 ntBASIC18.58■□□□□ 0.56
PFDN6O15212 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.58■□□□□ 0.56
PFDN6O15212 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 AC005082.1-201ENST00000413042 2259 ntBASIC18.58■□□□□ 0.56
PFDN6O15212 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PFDN6O15212 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN6O15212 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.58■□□□□ 0.56
PFDN6O15212 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.57■□□□□ 0.56
PFDN6O15212 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
PFDN6O15212 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.57■□□□□ 0.56
PFDN6O15212 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PFDN6O15212 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.57■□□□□ 0.56
PFDN6O15212 C2orf69P3-201ENST00000565542 1120 ntBASIC18.57■□□□□ 0.56
PFDN6O15212 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.57■□□□□ 0.56
PFDN6O15212 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 AC073592.3-201ENST00000625118 1834 ntBASIC18.57■□□□□ 0.56
PFDN6O15212 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PFDN6O15212 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.57■□□□□ 0.56
PFDN6O15212 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.57■□□□□ 0.56
PFDN6O15212 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN6O15212 KRT8P45-201ENST00000414328 1447 ntBASIC18.57■□□□□ 0.56
PFDN6O15212 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN6O15212 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN6O15212 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN6O15212 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN6O15212 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN6O15212 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN6O15212 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms