Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.85■□□□□ 0.29
SMAD9O15198 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD9O15198 AL512353.2-201ENST00000448759 1962 ntBASIC16.85■□□□□ 0.29
SMAD9O15198 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD9O15198 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMAD9O15198 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD9O15198 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD9O15198 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SMAD9O15198 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD9O15198 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMAD9O15198 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SMAD9O15198 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMAD9O15198 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.84■□□□□ 0.29
SMAD9O15198 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.84■□□□□ 0.29
SMAD9O15198 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SMAD9O15198 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.84■□□□□ 0.29
SMAD9O15198 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.84■□□□□ 0.29
SMAD9O15198 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SMAD9O15198 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.84■□□□□ 0.29
SMAD9O15198 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.84■□□□□ 0.29
SMAD9O15198 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SMAD9O15198 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SMAD9O15198 GPAT2P1-201ENST00000444924 1672 ntBASIC16.84■□□□□ 0.29
SMAD9O15198 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.84■□□□□ 0.29
SMAD9O15198 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.84■□□□□ 0.29
SMAD9O15198 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD9O15198 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SMAD9O15198 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMAD9O15198 AC018470.1-201ENST00000624790 3129 ntBASIC16.83■□□□□ 0.29
SMAD9O15198 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
SMAD9O15198 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMAD9O15198 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SMAD9O15198 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.83■□□□□ 0.28
SMAD9O15198 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.83■□□□□ 0.28
SMAD9O15198 AC005082.1-201ENST00000413042 2259 ntBASIC16.83■□□□□ 0.28
SMAD9O15198 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SMAD9O15198 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.83■□□□□ 0.28
SMAD9O15198 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SMAD9O15198 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SMAD9O15198 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
SMAD9O15198 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.83■□□□□ 0.28
SMAD9O15198 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SMAD9O15198 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SMAD9O15198 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD9O15198 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
SMAD9O15198 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.82■□□□□ 0.28
SMAD9O15198 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD9O15198 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMAD9O15198 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD9O15198 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD9O15198 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SMAD9O15198 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
SMAD9O15198 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD9O15198 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD9O15198 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMAD9O15198 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 HMGA1P5-201ENST00000412453 271 ntBASIC16.82■□□□□ 0.28
SMAD9O15198 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 SLC25A3P1-201ENST00000443844 931 ntBASIC16.82■□□□□ 0.28
SMAD9O15198 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.82■□□□□ 0.28
SMAD9O15198 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.82■□□□□ 0.28
SMAD9O15198 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD9O15198 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms