Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 TSPY14P-201ENST00000303979 915 ntBASIC19.87■□□□□ 0.77
FOXN3O00409 AL596275.1-201ENST00000423464 877 ntBASIC19.87■□□□□ 0.77
FOXN3O00409 CCR12P-201ENST00000446203 998 ntBASIC19.87■□□□□ 0.77
FOXN3O00409 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXN3O00409 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXN3O00409 CR769767.2-201ENST00000622735 460 ntBASIC19.87■□□□□ 0.77
FOXN3O00409 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXN3O00409 AC116562.4-202ENST00000641738 218 ntBASIC19.87■□□□□ 0.77
FOXN3O00409 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN3O00409 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN3O00409 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN3O00409 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXN3O00409 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
FOXN3O00409 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
FOXN3O00409 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN3O00409 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXN3O00409 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
FOXN3O00409 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FOXN3O00409 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN3O00409 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FOXN3O00409 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXN3O00409 BX088651.1-201ENST00000540551 451 ntBASIC19.86■□□□□ 0.77
FOXN3O00409 C2orf69P3-201ENST00000565542 1120 ntBASIC19.86■□□□□ 0.77
FOXN3O00409 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXN3O00409 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
FOXN3O00409 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXN3O00409 ESPNP-201ENST00000270691 2015 ntBASIC19.86■□□□□ 0.77
FOXN3O00409 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 AL162741.1-201ENST00000565563 1558 ntBASIC19.86■□□□□ 0.77
FOXN3O00409 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.86■□□□□ 0.77
FOXN3O00409 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXN3O00409 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
FOXN3O00409 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
FOXN3O00409 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXN3O00409 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXN3O00409 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 AP000593.1-201ENST00000393668 712 ntBASIC19.85■□□□□ 0.77
FOXN3O00409 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.85■□□□□ 0.77
FOXN3O00409 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXN3O00409 AC010947.1-201ENST00000623454 693 ntBASIC19.85■□□□□ 0.77
FOXN3O00409 AC066615.1-201ENST00000640911 628 ntBASIC19.85■□□□□ 0.77
FOXN3O00409 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXN3O00409 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXN3O00409 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXN3O00409 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXN3O00409 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
FOXN3O00409 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
FOXN3O00409 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXN3O00409 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
FOXN3O00409 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN3O00409 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXN3O00409 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXN3O00409 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN3O00409 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN3O00409 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
FOXN3O00409 AC093827.2-201ENST00000512654 315 ntBASIC19.84■□□□□ 0.77
FOXN3O00409 EGLN1P1-201ENST00000531623 762 ntBASIC19.84■□□□□ 0.77
FOXN3O00409 WWOX-216ENST00000569818 525 ntBASIC19.84■□□□□ 0.77
FOXN3O00409 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
FOXN3O00409 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
FOXN3O00409 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN3O00409 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXN3O00409 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXN3O00409 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXN3O00409 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXN3O00409 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms