Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.78■□□□□ 0.76
O00370 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.78■□□□□ 0.76
O00370 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.78■□□□□ 0.76
O00370 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
O00370 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
O00370 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 AC073508.3-201ENST00000619697 1419 ntBASIC19.77■□□□□ 0.76
O00370 AL499627.1-201ENST00000569373 2188 ntBASIC19.77■□□□□ 0.76
O00370 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
O00370 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.77■□□□□ 0.76
O00370 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
O00370 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.77■□□□□ 0.76
O00370 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.77■□□□□ 0.76
O00370 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
O00370 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
O00370 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
O00370 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
O00370 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
O00370 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
O00370 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.77■□□□□ 0.75
O00370 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
O00370 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
O00370 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.76■□□□□ 0.75
O00370 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.76■□□□□ 0.75
O00370 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.76■□□□□ 0.75
O00370 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.76■□□□□ 0.75
O00370 AC009947.2-201ENST00000444014 672 ntBASIC19.76■□□□□ 0.75
O00370 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 KRT18P41-201ENST00000518924 1277 ntBASIC19.76■□□□□ 0.75
O00370 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.76■□□□□ 0.75
O00370 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
O00370 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
O00370 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
O00370 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.76■□□□□ 0.75
O00370 AC034236.2-201ENST00000606662 1610 ntBASIC19.76■□□□□ 0.75
O00370 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
O00370 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
O00370 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.76■□□□□ 0.75
O00370 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.75■□□□□ 0.75
O00370 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 AC005521.1-201ENST00000393351 872 ntBASIC19.75■□□□□ 0.75
O00370 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.75■□□□□ 0.75
O00370 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.75■□□□□ 0.75
O00370 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.75■□□□□ 0.75
O00370 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.75■□□□□ 0.75
O00370 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
O00370 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
O00370 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.75■□□□□ 0.75
O00370 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.75■□□□□ 0.75
O00370 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
O00370 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
O00370 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
O00370 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.75■□□□□ 0.75
O00370 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
O00370 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
O00370 AL137013.1-201ENST00000432946 1228 ntBASIC19.74■□□□□ 0.75
O00370 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms