Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 AC139749.1-202ENST00000617529 3139 ntBASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCP4L1A6NKN8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 AC107918.4-201ENST00000641966 3141 ntBASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 AC097376.2-205ENST00000610159 5334 ntBASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCP4L1A6NKN8 AC087386.2-201ENST00000623212 4637 ntBASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.48□□□□□ -0.09
PCP4L1A6NKN8 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
PCP4L1A6NKN8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCP4L1A6NKN8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
PCP4L1A6NKN8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCP4L1A6NKN8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PCP4L1A6NKN8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.47□□□□□ -0.09
PCP4L1A6NKN8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCP4L1A6NKN8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCP4L1A6NKN8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms