Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 PP12613-201ENST00000424958 2230 ntBASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 TSPY13P-201ENST00000338964 914 ntBASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 AC005052.1-201ENST00000625181 2492 ntBASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRBV20-1A0A075B6N2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.4□□□□□ -0.43
TRBV20-1A0A075B6N2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
TRBV20-1A0A075B6N2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 AC245052.3-201ENST00000450182 901 ntBASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 AC126755.1-201ENST00000525846 6405 ntBASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.39□□□□□ -0.43
TRBV20-1A0A075B6N2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 AC009237.3-201ENST00000393279 1427 ntBASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRBV20-1A0A075B6N2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms