Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAI2Q9Y5P3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 KRT18P41-201ENST00000518924 1277 ntBASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 AC022616.7-201ENST00000525383 220 ntBASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 AC112497.1-201ENST00000624824 639 ntBASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAI2Q9Y5P3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.77■□□□□ 0.59
RAI2Q9Y5P3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAI2Q9Y5P3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.77■□□□□ 0.59
RAI2Q9Y5P3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 KRT8P7-201ENST00000533003 1432 ntBASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 HOXB1-202ENST00000577092 1414 ntBASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 AP000523.1-201ENST00000398242 1049 ntBASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 KRT18P48-201ENST00000434763 852 ntBASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 COX11P1-201ENST00000489116 835 ntBASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAI2Q9Y5P3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 AC112777.1-201ENST00000540175 1423 ntBASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 AC140113.3-201ENST00000605663 199 ntBASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 AC139887.4-201ENST00000607877 719 ntBASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 AC024243.1-201ENST00000609234 778 ntBASIC18.75■□□□□ 0.59
RAI2Q9Y5P3 AL023973.1-201ENST00000624619 620 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms